RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 CPSF2Q9P2I0 782 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 NENFQ9UMX5 172 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 PCDHA6Q9UN73 950 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 STXBP5LQ9Y2K9 1186 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 ARL2BPQ9Y2Y0 163 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 USP15Q9Y4E8 981 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 PCDHA8Q9Y5H6 950 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 PCDHA1Q9Y5I3 950 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 TACC3Q9Y6A5 838 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 ZNF236Q9UL36 1845 aa8.15□□□□□ -1.11
TRIM4-204ENST00000447480 BAZ2BQ9UIF8 2168 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 KDM3AQ9Y4C1 1321 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 RLFQ13129 1914 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 SPDYE3A6NKU9 549 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 ENO4A6NNW6 628 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PDLIM1O00151 329 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 KCNK3O14649 394 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 NDC80O14777 642 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 TNPO2O14787 897 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 RGS16O15492 202 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 SNX3O60493 162 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 HIP1RO75146 1068 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 AP1G2O75843 785 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 STAM2O75886 525 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 DGAT1O75907 488 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 SNUPNO95149 360 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PLEKHA8P1O95397 391 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 GJB6O95452 261 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 OAS1P00973 400 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 RARGP13631 454 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 CCNB1P14635 433 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PLCG1P19174 1290 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 KLRC1P26715 233 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 HPDP32754 393 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 CTCFP49711 727 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 NAPAP54920 295 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 ROR2Q01974 943 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 RNASELQ05823 741 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 GFPT1Q06210 699 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 CRHR2Q13324 411 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 AP3B2Q13367 1082 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 DYNC1I2Q13409 638 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 IRF5Q13568 498 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 MOGSQ13724 837 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PPP2R5AQ15172 486 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 NFIL3Q16649 462 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 ZCWPW2Q504Y3 356 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 TDRD12Q587J7 1177 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 WASHC2DQ5SRD0 308 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 TTC19Q6DKK2 380 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 XRRA1Q6P2D8 792 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PEX26Q7Z412 305 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 NEK8Q86SG6 692 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 CCDC65Q8IXS2 484 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 ANKRD35Q8N283 1001 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 DNERQ8NFT8 737 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 TPCN2Q8NHX9 752 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 SNIP1Q8TAD8 396 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 UBLCP1Q8WVY7 318 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 TBC1D5Q92609 795 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 INPP5DQ92835 1189 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 BICD1Q96G01 975 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 P2RX7Q99572 595 aaKnown RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PHACTR1Q9C0D0 580 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 VCXQ9H320 206 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 JMJD4Q9H9V9 463 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 FAM207AQ9NSI2 230 aaPredicted RBP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 TXLNGQ9NUQ3 528 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 RNF186Q9NXI6 227 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PCYOX1Q9UHG3 505 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 BAIAP2L1Q9UHR4 511 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 SALL4Q9UJQ4 1053 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 AMFRQ9UKV5 643 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 MAPK8IP1Q9UQF2 711 aa8.14□□□□□ -1.11
TRIM4-204ENST00000447480 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRIM4-204ENST00000447480 PLXNB2O15031 1838 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 SLC15A5A6NIM6 579 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ASB14A6NK59 587 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 CETN3O15182 167 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 CEP104O60308 925 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 AOC2O75106 756 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 TRPA1O75762 1119 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 NOL4O94818 638 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 MMEP08473 750 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 PLEKP08567 350 aaPredicted RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 HOXC6P09630 235 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 TMEM253P0C7T8 217 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 POLR2MP0CAP2 368 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 GOLGA8HP0CJ92 632 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 SLURP2P0DP57 97 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 BCRP11274 1271 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ALAS1P13196 640 aa8.13□□□□□ -1.11
TRIM4-204ENST00000447480 ATP2A2P16615 1042 aaKnown RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 RPL13P26373 211 aaKnown RBP8.13□□□□□ -1.11
TRIM4-204ENST00000447480 CXCR5P32302 372 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms