RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PDXDC1Q6P996 788 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 DCLRE1AQ6PJP8 1040 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 MPZL3Q6UWV2 235 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 ALKAL1Q6UXT8 129 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 SYT2Q8N9I0 419 aaPredicted RBP19.95■□□□□ 0.78
COL9A1-205ENST00000447041 FLCNQ8NFG4 579 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 DDX27Q96GQ7 796 aaKnown RBP19.95■□□□□ 0.78
COL9A1-205ENST00000447041 ZBTB45Q96K62 511 aaPredicted RBP19.95■□□□□ 0.78
COL9A1-205ENST00000447041 ZMAT2Q96NC0 199 aaKnown RBP19.95■□□□□ 0.78
COL9A1-205ENST00000447041 TIPINQ9BVW5 301 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 MTRRQ9UBK8 725 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 DAXXQ9UER7 740 aaPredicted RBP19.95■□□□□ 0.78
COL9A1-205ENST00000447041 SMC3Q9UQE7 1217 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 CITO14578 2027 aa19.95■□□□□ 0.78
COL9A1-205ENST00000447041 NPHP3-ACAD11A0A0J9YXS1 232 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 H0Y858 1186 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 GALR2O43603 387 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-205ENST00000447041 PLA2G4BP0C869 781 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 PLS3P13797 630 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 OR1D2P34982 312 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 NTHL1P78549 312 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 PPM1LQ5SGD2 360 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 ARL6IP4Q66PJ3 421 aaKnown RBP19.94■□□□□ 0.78
COL9A1-205ENST00000447041 RSPO2Q6UXX9 243 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-205ENST00000447041 GRASPQ7Z6J2 395 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-205ENST00000447041 TMEM161BQ8NDZ6 487 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 ST13P5Q8NFI4 369 aaPredicted RBP19.94■□□□□ 0.78
COL9A1-205ENST00000447041 SLC7A14Q8TBB6 771 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 CDK5RAP3Q96JB5 506 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 TCHPQ9BT92 498 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 ANKFY1Q9P2R3 1169 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 FBXL21Q9UKT6 434 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 CDY1Q9Y6F8 540 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 PIEZO1Q92508 2521 aa19.94■□□□□ 0.78
COL9A1-205ENST00000447041 DOCK6Q96HP0 2047 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 DMDP11532 3685 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 PODXLO00592 558 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 CCL16O15467 120 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 CFHP08603 1231 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 MAPTP10636 758 aaKnown RBP19.93■□□□□ 0.78
COL9A1-205ENST00000447041 NPR3P17342 541 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 MCM2P49736 904 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 NUBP1P53384 320 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 STRN3Q13033 797 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 RAB33AQ14088 237 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 SEZ6Q53EL9 994 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 SIX5Q8N196 739 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 LRRC15Q8TF66 581 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 SPIRE2Q8WWL2 714 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 TBC1D32Q96NH3 1257 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 ACAP3Q96P50 834 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 NTPCRQ9BSD7 190 aaKnown RBP19.93■□□□□ 0.78
COL9A1-205ENST00000447041 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL9A1-205ENST00000447041 CNTN3Q9P232 1028 aa19.93■□□□□ 0.78
COL9A1-205ENST00000447041 HNRNPA1P09651 372 aaKnown RBP eCLIP19.92■□□□□ 0.78
COL9A1-205ENST00000447041 LAMP2P13473 410 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 FSHRP23945 695 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 HOXA9P31269 272 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 CLCN5P51795 746 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 NOLC1Q14978 699 aaKnown RBP eCLIP19.92■□□□□ 0.78
COL9A1-205ENST00000447041 AXDND1Q5T1B0 1012 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-205ENST00000447041 SLC44A3Q8N4M1 653 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 ATOH1Q92858 354 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-205ENST00000447041 C18orf25Q96B23 403 aaPredicted RBP19.92■□□□□ 0.78
COL9A1-205ENST00000447041 SLC38A7Q9NVC3 462 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 POLIQ9UNA4 740 aa19.92■□□□□ 0.78
COL9A1-205ENST00000447041 TRAPPC3O43617 180 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 PI15O43692 258 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 TOM1L1O75674 476 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 KCNE1P15382 129 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 GRIN1Q05586 938 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 HTR4Q13639 388 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 ARSHQ5FYA8 562 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 LARP1BQ659C4 914 aaKnown RBP19.91■□□□□ 0.78
COL9A1-205ENST00000447041 KCTD17Q8N5Z5 321 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 KCND2Q9NZV8 630 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.91■□□□□ 0.78
COL9A1-205ENST00000447041 BACE2Q9Y5Z0 518 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 NUMBLQ9Y6R0 609 aa19.91■□□□□ 0.78
COL9A1-205ENST00000447041 KRBA1A5PL33 1030 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 ANHXE9PGG2 379 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 AOC1P19801 751 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 SMTNP53814 917 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 NCKAP1LP55160 1127 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 ANKS3Q6ZW76 656 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 TMEM130Q8N3G9 435 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 NXPE3Q969Y0 559 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 AK8Q96MA6 479 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 HAPLN2Q9GZV7 340 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 HCFC1R1Q9NWW0 138 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 CA14Q9ULX7 337 aa19.9■□□□□ 0.78
COL9A1-205ENST00000447041 XYLBO75191 536 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 SRFP11831 508 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 ROR1Q01973 937 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 MCL1Q07820 350 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 DHX8Q14562 1220 aaKnown RBP19.89■□□□□ 0.77
COL9A1-205ENST00000447041 SLC10A6Q3KNW5 377 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 VARS2Q5ST30 1063 aaKnown RBP19.89■□□□□ 0.77
COL9A1-205ENST00000447041 ZPBP2Q6X784 338 aa19.89■□□□□ 0.77
COL9A1-205ENST00000447041 ITFG1Q8TB96 612 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms