RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 C2CD2LO14523 706 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 OGTO15294 1046 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 CMA1P23946 247 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 CA8P35219 290 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 DSG1Q02413 1049 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 ENOX2Q16206 610 aaKnown RBP23.83■■□□□ 1.41
TRAF4-205ENST00000444415 UPP1Q16831 310 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 L1TD1Q5T7N2 865 aaKnown RBP23.83■■□□□ 1.41
TRAF4-205ENST00000444415 SYCE2Q6PIF2 218 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 SLC22A17Q8WUG5 538 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 KLHL5Q96PQ7 755 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 SERTAD1Q9UHV2 236 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 CD207Q9UJ71 328 aa23.83■■□□□ 1.41
TRAF4-205ENST00000444415 FAM237AA0A1B0GTK4 181 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 TMEM189-UBE2V1I3L0A0 370 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 NR1I2O75469 434 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 GCNT3O95395 438 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 ADRB2P07550 413 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 CLTAP09496 248 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 EPCAMP16422 314 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 HOXD13P35453 343 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 MATR3P43243 847 aaKnown RBP eCLIP23.82■■□□□ 1.4
TRAF4-205ENST00000444415 SPAG1Q07617 926 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 RTP2Q5QGT7 225 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 ZSWIM2Q8NEG5 633 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 BLZF1Q9H2G9 400 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 MAGEF1Q9HAY2 307 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 CD320Q9NPF0 282 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 STK39Q9UEW8 545 aa23.82■■□□□ 1.4
TRAF4-205ENST00000444415 CPSF3Q9UKF6 684 aaKnown RBP23.82■■□□□ 1.4
TRAF4-205ENST00000444415 ABCD1P33897 745 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 GLUD2P49448 558 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 SMAD4Q13485 552 aaKnown RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 CUL4BQ13620 913 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 ANKRD54Q6NXT1 300 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 CRELD2Q6UXH1 353 aaPredicted RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 CCDC65Q8IXS2 484 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 MSTO1Q9BUK6 570 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 S1PR5Q9H228 398 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 GOLPH3LQ9H4A5 285 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 MRPL17Q9NRX2 175 aaKnown RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 TUBGCP4Q9UGJ1 667 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 CDH22Q9UJ99 828 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 ATP6V1DQ9Y5K8 247 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 MTCL1Q9Y4B5 1905 aaKnown RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 TADA2AO75478 443 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 SF3B1O75533 1304 aaKnown RBP eCLIP23.81■■□□□ 1.43e-6■■■■□ 20.7
TRAF4-205ENST00000444415 PRPF6O94906 941 aaKnown RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 URODP06132 367 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 ASIC1P78348 528 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 SMAD2Q15796 467 aaKnown RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 ZBTB6Q15916 424 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 C2orf16Q68DN1 1984 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 SCAND2PQ9GZW5 306 aaPredicted RBP23.81■■□□□ 1.4
TRAF4-205ENST00000444415 RXFP1Q9HBX9 757 aa23.81■■□□□ 1.4
TRAF4-205ENST00000444415 FSD2A1L4K1 749 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 LACTBL1A8MY62 500 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 TEX28O15482 410 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 SLFN14P0C7P3 912 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 AFMP43652 599 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 CLCN4P51793 760 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 NDUFA8P51970 172 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 EPM2AIP1Q7L775 607 aaPredicted RBP23.8■■□□□ 1.4
TRAF4-205ENST00000444415 LRRC27Q9C0I9 530 aa23.8■■□□□ 1.4
TRAF4-205ENST00000444415 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-205ENST00000444415 KLRC4O43908 158 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 B3GAT3O94766 335 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 ACOT2P49753 483 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 NUCB2P80303 420 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 AMPD3Q01432 767 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 BMS1Q14692 1282 aaKnown RBP23.79■■□□□ 1.4
TRAF4-205ENST00000444415 USP41Q3LFD5 358 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 PUS10Q3MIT2 529 aaKnown RBP23.79■■□□□ 1.4
TRAF4-205ENST00000444415 UNC13DQ70J99 1090 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 SUSD6Q92537 303 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 UROC1Q96N76 676 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 ACCSQ96QU6 501 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 PLEKHA5Q9HAU0 1116 aa23.79■■□□□ 1.4
TRAF4-205ENST00000444415 USP15Q9Y4E8 981 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-205ENST00000444415 I3L4J1 428 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 PODXLO00592 558 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 RPL17P18621 184 aaKnown RBP23.78■■□□□ 1.4
TRAF4-205ENST00000444415 BRCC3P46736 316 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 WNT7BP56706 349 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 FAM171A1Q5VUB5 890 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 KANK3Q6NY19 840 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 DCLRE1AQ6PJP8 1040 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 PRSS55Q6UWB4 352 aaPredicted RBP23.78■■□□□ 1.4
TRAF4-205ENST00000444415 CASP10Q92851 521 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 PAGE5Q96GU1 130 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 APOL5Q9BWW9 433 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 SLC38A7Q9NVC3 462 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 AGO2Q9UKV8 859 aaKnown RBP23.78■■□□□ 1.4
TRAF4-205ENST00000444415 PCDHB13Q9Y5F0 798 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 SCN1AP35498 2009 aa23.78■■□□□ 1.4
TRAF4-205ENST00000444415 A0A1W2PQ27 194 aa23.77■■□□□ 1.4
TRAF4-205ENST00000444415 A0A1W2PQ64 194 aa23.77■■□□□ 1.4
TRAF4-205ENST00000444415 A0A1W2PQD8 194 aa23.77■■□□□ 1.4
TRAF4-205ENST00000444415 GUCY2FP51841 1108 aa23.77■■□□□ 1.4
TRAF4-205ENST00000444415 ALCAMQ13740 583 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms