RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 NOX1Q9Y5S8 564 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 ACTL7AQ9Y615 435 aa6.14□□□□□ -1.43
VPS50-206ENST00000443443 LOC102724159A0A0B4J2E5 919 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 GRID2IPA4D2P6 1211 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 FPR1P21462 350 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 PROZP22891 400 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 ALDH1A3P47895 512 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 AVPR1BP47901 424 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 MTNR1BP49286 362 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 KLF1Q13351 362 aaPredicted RBP6.13□□□□□ -1.43
VPS50-206ENST00000443443 TP53BP2Q13625 1128 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 SEPT2Q15019 361 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 PWP2Q15269 919 aaKnown RBP6.13□□□□□ -1.43
VPS50-206ENST00000443443 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 RHOT2Q8IXI1 618 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 DRC7Q8IY82 874 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS50-206ENST00000443443 MYOCQ99972 504 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 C7orf25Q9BPX7 421 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 TMX1Q9H3N1 280 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 TOR3AQ9H497 397 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 RIOX1Q9H6W3 641 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 SPC25Q9HBM1 224 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 INTUQ9ULD6 942 aa6.13□□□□□ -1.43
VPS50-206ENST00000443443 FAM171A2A8MVW0 826 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 ERVK-21P61565 698 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 TMED8Q6PL24 325 aaPredicted RBP6.12□□□□□ -1.43
VPS50-206ENST00000443443 Q6YL49 198 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 PHLDB1Q86UU1 1377 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 DDX42Q86XP3 938 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-206ENST00000443443 CNTD1Q8N815 330 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-206ENST00000443443 CYFIP2Q96F07 1278 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-206ENST00000443443 ZSWIM1Q9BR11 485 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 MANSC1Q9H8J5 431 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 KLHL11Q9NVR0 708 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 TESQ9UGI8 421 aaKnown RBP6.12□□□□□ -1.43
VPS50-206ENST00000443443 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
VPS50-206ENST00000443443 A0A1B0GTW7 788 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 PIPSLA2A3N6 862 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 TEX33O43247 280 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 GPR32O75388 356 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 CDKL5O76039 1030 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 SPDEFO95238 335 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 FOSP01100 380 aaPredicted RBP6.11□□□□□ -1.43
VPS50-206ENST00000443443 CFIP05156 583 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 HKR1P10072 659 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 ITGAMP11215 1152 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 POU3F3P20264 500 aaPredicted RBP6.11□□□□□ -1.43
VPS50-206ENST00000443443 AGXTP21549 392 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 SLC6A2P23975 617 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 GUCY1A2P33402 732 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 COL10A1Q03692 680 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 MGAT2Q10469 447 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 ACAP2Q15057 778 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 GORABQ5T7V8 394 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 FOXR2Q6PJQ5 311 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 RHOT1Q8IXI2 618 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 TMEM132CQ8N3T6 1108 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 NRG4Q8WWG1 115 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 HOXB13Q92826 284 aaPredicted RBP6.11□□□□□ -1.43
VPS50-206ENST00000443443 ADAM2Q99965 735 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 ALOXE3Q9BYJ1 711 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 PUS7LQ9H0K6 701 aaKnown RBP6.11□□□□□ -1.43
VPS50-206ENST00000443443 MKS1Q9NXB0 559 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 DKK2Q9UBU2 259 aa6.11□□□□□ -1.43
VPS50-206ENST00000443443 AATKQ6ZMQ8 1374 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 MYBBP1AQ9BQG0 1328 aaKnown RBP6.1□□□□□ -1.43
VPS50-206ENST00000443443 LMNAP02545 664 aaKnown RBP6.1□□□□□ -1.43
VPS50-206ENST00000443443 PCSK1P29120 753 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 SLC6A9P48067 706 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 CREMQ03060 361 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 ABHD17BQ5VST6 288 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 OTUD7BQ6GQQ9 843 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 ARMC6Q6NXE6 501 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 OLFML1Q6UWY5 402 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 EXOC8Q8IYI6 725 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 OR2I1PQ8NGU4 316 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 CASKIN2Q8WXE0 1202 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 RNF31Q96EP0 1072 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 GSTO2Q9H4Y5 243 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 METTL14Q9HCE5 456 aaKnown RBP6.1□□□□□ -1.43
VPS50-206ENST00000443443 SLC23A1Q9UHI7 598 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 SAP30BPQ9UHR5 308 aaKnown RBP6.1□□□□□ -1.43
VPS50-206ENST00000443443 ATP8A1Q9Y2Q0 1164 aa6.1□□□□□ -1.43
VPS50-206ENST00000443443 MTO1Q9Y2Z2 717 aaKnown RBP6.1□□□□□ -1.43
VPS50-206ENST00000443443 TCRBV7S2A1N4TA0A589 114 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 KIAA0355O15063 1070 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 KIAA0391O15091 583 aaKnown RBP6.09□□□□□ -1.43
VPS50-206ENST00000443443 TPD52L2O43399 206 aaKnown RBP6.09□□□□□ -1.43
VPS50-206ENST00000443443 ERN1O75460 977 aaKnown RBP6.09□□□□□ -1.43
VPS50-206ENST00000443443 PRSS23O95084 383 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 GPANK1O95872 356 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 ELANEP08246 267 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 DDCP20711 480 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 HSD11B2P80365 405 aa6.09□□□□□ -1.43
VPS50-206ENST00000443443 RNF187Q5TA31 235 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms