RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 MAPK4P31152 587 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 SSR1P43307 286 aaKnown RBP17.2■□□□□ 0.34
NLE1-202ENST00000442241 SLC29A2Q14542 456 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 ACAD10Q6JQN1 1059 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 LRIG3Q6UXM1 1119 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 MICALCLQ6ZW33 695 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 NLRP14Q86W24 1093 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 ZNF473Q8WTR7 871 aaKnown RBP17.2■□□□□ 0.34
NLE1-202ENST00000442241 ZBTB10Q96DT7 871 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 C1orf112Q9NSG2 853 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 GGA2Q9UJY4 613 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 USTQ9Y2C2 406 aa17.2■□□□□ 0.34
NLE1-202ENST00000442241 KIF1CO43896 1103 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 DGAT1O75907 488 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 GZMAP12544 262 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 SCP2P22307 547 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 QPCTQ16769 361 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 CLEC16AQ2KHT3 1053 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 CCDC38Q502W7 563 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 FMNL3Q8IVF7 1028 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 C11orf70Q9BRQ4 267 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 PDLIM7Q9NR12 457 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 CHST7Q9NS84 486 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 GGA3Q9NZ52 723 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 COQ4Q9Y3A0 265 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 MIF4GDA9UHW6 222 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 CTNNA2P26232 953 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 MARK3P27448 753 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 IFI35P80217 286 aaPredicted RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 SIX1Q15475 284 aaPredicted RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 TREML2Q5T2D2 321 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 SAMD3Q8N6K7 520 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 C1orf131Q8NDD1 294 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 OR5B17Q8NGF7 314 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 MYCBPAPQ8TBZ2 947 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 EPS8L3Q8TE67 593 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 TIPINQ9BVW5 301 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 APOBEC3GQ9HC16 384 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 MAP3K20Q9NYL2 800 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 FBXO40Q9UH90 709 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 GTF3C4Q9UKN8 822 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 DIS3Q9Y2L1 958 aaKnown RBP17.19■□□□□ 0.34
NLE1-202ENST00000442241 CENPFP49454 3210 aa17.19■□□□□ 0.34
NLE1-202ENST00000442241 MYH9P35579 1960 aaKnown RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 SRRM3A6NNA2 597 aaPredicted RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 MAPK13O15264 365 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 PPFIA2O75334 1257 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 VNN1O95497 513 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 COILP38432 576 aaPredicted RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 BAG6P46379 1132 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 HADHBP55084 474 aaKnown RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 ZNF394Q53GI3 561 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 TMEM270Q6UE05 265 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 ANKRD35Q8N283 1001 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 SPIRE2Q8WWL2 714 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 NTPCRQ9BSD7 190 aaKnown RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 WNT8AQ9H1J5 351 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 AZI2Q9H6S1 392 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 ACAD9Q9H845 621 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 AGO2Q9UKV8 859 aaKnown RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 PCDHA3Q9Y5H8 950 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 MROH7Q68CQ1 1323 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 CHUKO15111 745 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 GLRA2P23416 452 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 ACTN3Q08043 901 aaPredicted RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 MTMR3Q13615 1198 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 PPP1R7Q15435 360 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 CRELD2Q6UXH1 353 aaPredicted RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 CDR2LQ86X02 465 aaPredicted RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 TMC2Q8TDI7 906 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 RPS6KC1Q96S38 1066 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 TEX13BQ9BXU2 312 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 ARHGAP28Q9P2N2 729 aa17.18■□□□□ 0.34
NLE1-202ENST00000442241 R3HDM2Q9Y2K5 976 aaKnown RBP17.18■□□□□ 0.34
NLE1-202ENST00000442241 RLFQ13129 1914 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 RASSF9O75901 435 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 SUPT20HL2P0C7V6 817 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 TNFSF9P41273 254 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 RWDD2BP57060 319 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 PPP2R2AP63151 447 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 SUPT20HL1Q3ZLR7 823 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 PARP14Q460N5 1801 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 CCDC50Q8IVM0 306 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 SELENOSQ9BQE4 189 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 DDX23Q9BUQ8 820 aaKnown RBP17.17■□□□□ 0.34
NLE1-202ENST00000442241 CCDC113Q9H0I3 377 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 AS3MTQ9HBK9 375 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 SLC12A6Q9UHW9 1150 aa17.17■□□□□ 0.34
NLE1-202ENST00000442241 PHIPQ8WWQ0 1821 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms