RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
TTC28-203ENST00000442232 MPZL3Q6UWV2 235 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 ANKS3Q6ZW76 656 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 GRASPQ7Z6J2 395 aaPredicted RBP12.9□□□□□ -0.34
TTC28-203ENST00000442232 RASSF8Q8NHQ8 419 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 SLC7A14Q8TBB6 771 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 SNX27Q96L92 541 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.34
TTC28-203ENST00000442232 KCND2Q9NZV8 630 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 ANKFY1Q9P2R3 1169 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 MTRRQ9UBK8 725 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
TTC28-203ENST00000442232 NUB1Q9Y5A7 615 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 MYH15Q9Y2K3 1946 aa12.9□□□□□ -0.35
TTC28-203ENST00000442232 SMIM28A0A1B0GU29 152 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 PODXLO00592 558 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 CCL16O15467 120 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
TTC28-203ENST00000442232 GFRA3O60609 400 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 PLS3P13797 630 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 AOC1P19801 751 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 FGFR3P22607 806 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 UPP1Q16831 310 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 UVSSAQ2YD98 709 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
TTC28-203ENST00000442232 ARL6IP4Q66PJ3 421 aaKnown RBP12.89□□□□□ -0.35
TTC28-203ENST00000442232 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 DAW1Q8N136 415 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 CEP120Q8N960 986 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 RSAD2Q8WXG1 361 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 BICD1Q96G01 975 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 CXCL16Q9H2A7 254 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 CA14Q9ULX7 337 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 CDY1Q9Y6F8 540 aa12.89□□□□□ -0.35
TTC28-203ENST00000442232 H7C4K7 107 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 SLC26A4O43511 780 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 TOM1L1O75674 476 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 BMP15O95972 392 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 PLA2G4BP0C869 781 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
TTC28-203ENST00000442232 ELF1P32519 619 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 RAB33AQ14088 237 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 IL17AQ16552 155 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 HYIQ5T013 277 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 CWF19L1Q69YN2 538 aaKnown RBP12.88□□□□□ -0.35
TTC28-203ENST00000442232 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 AK8Q96MA6 479 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 PLIN2Q99541 437 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
TTC28-203ENST00000442232 LARSQ9P2J5 1176 aaKnown RBP12.88□□□□□ -0.35
TTC28-203ENST00000442232 CDH7Q9ULB5 785 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 BACE2Q9Y5Z0 518 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 NUMBLQ9Y6R0 609 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 DOCK6Q96HP0 2047 aa12.88□□□□□ -0.35
TTC28-203ENST00000442232 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 PRRG1O14668 218 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 SYN3O14994 580 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 ADAM12O43184 909 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 LRG1P02750 347 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
TTC28-203ENST00000442232 POU2F2P09086 479 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 KCNE1P15382 129 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 PROZP22891 400 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 RPL9P32969 192 aaKnown RBP12.87□□□□□ -0.35
TTC28-203ENST00000442232 MCM4P33991 863 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 UBA7P41226 1012 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 BRCC3P46736 316 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 MAPK7Q13164 816 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 HTR4Q13639 388 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 PABPC1LQ4VXU2 614 aaKnown RBP12.87□□□□□ -0.35
TTC28-203ENST00000442232 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
TTC28-203ENST00000442232 ZPBP2Q6X784 338 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 TAS1R3Q7RTX0 852 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 SYT2Q8N9I0 419 aaPredicted RBP12.87□□□□□ -0.35
TTC28-203ENST00000442232 PTPRHQ9HD43 1115 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 CNTN3Q9P232 1028 aa12.87□□□□□ -0.35
TTC28-203ENST00000442232 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.87□□□□□ -0.35
TTC28-203ENST00000442232 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 ANHXE9PGG2 379 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 I3L4J1 428 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 CLDN3O15551 220 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 FAM13AO94988 1023 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 MAPTP10636 758 aaKnown RBP12.86□□□□□ -0.35
TTC28-203ENST00000442232 SCP2P22307 547 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 LIG4P49917 911 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 ARPP19P56211 112 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 NTHL1P78549 312 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms