RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KANSL3Q9P2N6 904 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 TBX21Q9UL17 535 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 CAPN6Q9Y6Q1 641 aa7.97□□□□□ -1.13
CDC42BPA-208ENST00000442054 NT5C1B-RDH14C9J2C7 533 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 ZNF185O15231 689 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 POLR3GO15318 223 aaPredicted RBP7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 ACTN2P35609 894 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 MKRN4PQ13434 485 aaPredicted RBP7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 KCNK18Q7Z418 384 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 METTL23Q86XA0 190 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 RUBCNQ92622 972 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 FGD4Q96M96 766 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 GPRC5CQ9NQ84 441 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 MAPK8IP1Q9UQF2 711 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 NOC2LQ9Y3T9 749 aaKnown RBP7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.13
CDC42BPA-208ENST00000442054 FRMD3A2A2Y4 597 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 CCDC66A2RUB6 948 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 MYMKA6NI61 221 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 EML1O00423 815 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 EXOC3O60645 756 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 CAND2O75155 1236 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 RGS20O76081 388 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 TUBBP07437 444 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 PPM1AP35813 382 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 RGS19P49795 217 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZNF410Q86VK4 478 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 GLIS3Q8NEA6 775 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM71BQ8TC56 605 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 HELQQ8TDG4 1101 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 MORC4Q8TE76 937 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 PIK3R5Q8WYR1 880 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 KAT2BQ92831 832 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 RSAD1Q9HA92 442 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 MAGEC2Q9UBF1 373 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 DOCK1Q14185 1865 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 ARHGEF37A1IGU5 675 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 ENC1O14682 589 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 B3GAT3O94766 335 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 KCNA5P22460 613 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 TFAMQ00059 246 aaKnown RBP7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 CETN1Q12798 172 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 SNX17Q15036 470 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 PLPP4Q5VZY2 271 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 CATSPER3Q86XQ3 398 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 COG1Q8WTW3 980 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 HDAC7Q8WUI4 952 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 HAS1Q92839 578 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 CPB2Q96IY4 423 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 MBOAT7Q96N66 472 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 ACAP3Q96P50 834 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 MSTO1Q9BUK6 570 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 CXXC1Q9P0U4 656 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 TMEM59LQ9UK28 342 aa7.96□□□□□ -1.14
CDC42BPA-208ENST00000442054 ERICH4A6NGS2 130 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 HIP1RO75146 1068 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 RPA1P27694 616 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 VAV2P52735 878 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 FILIP1LQ4L180 1135 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 SRLQ86TD4 932 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 MAFAQ8NHW3 353 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 HPS3Q969F9 1004 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 EMID1Q96A84 441 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CNOT6LQ96LI5 555 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 FGFBP2Q9BYJ0 223 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 NACA2Q9H009 215 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 SNX12Q9UMY4 172 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 PSMD10O75832 226 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 KIF4AO95239 1232 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 EYA4O95677 639 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 COL6A1P12109 1028 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CPB1P15086 417 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 ATF7P17544 494 aaPredicted RBP7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CYP11B2P19099 503 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 PDIA5Q14554 519 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZSCAN26Q16670 478 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CCDC40Q4G0X9 1142 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 FBXO47Q5MNV8 452 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 ELMOD1Q8N336 334 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CCDC127Q96BQ5 260 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 PANK4Q9NVE7 773 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CTAGE15A4D2H0 777 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 RFXAPO00287 272 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CTAGE8P0CG41 777 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 EPB41P11171 864 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 LAG3P18627 525 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 BCAR1P56945 870 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 GLRA4Q5JXX5 417 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.95□□□□□ -1.144e-6■■□□□ 13.7
CDC42BPA-208ENST00000442054 CTAGE6Q86UF2 777 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 CTAGE4Q8IX94 777 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 KIAA0319LQ8IZA0 1049 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 LPPQ93052 612 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 GAD1Q99259 594 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 TLR10Q9BXR5 811 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 MED4Q9NPJ6 270 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 SPG21Q9NZD8 308 aa7.95□□□□□ -1.14
CDC42BPA-208ENST00000442054 DPP7Q9UHL4 492 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms