RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZDHHC9Q9Y397 364 aa15□□□□□ -0.01
LTBR-202ENST00000440421 CITO14578 2027 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 TISP43B9A030 160 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 ANKRD63C9JTQ0 380 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 I3L4J1 428 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 CLTAP09496 248 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 RPL17P18621 184 aaKnown RBP14.99□□□□□ -0.01
LTBR-202ENST00000440421 ABCD1P33897 745 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 CBX2Q14781 532 aaPredicted RBP14.99□□□□□ -0.01
LTBR-202ENST00000440421 E2F4Q16254 413 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 UPP1Q16831 310 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 HERC4Q5GLZ8 1057 aaPredicted RBP14.99□□□□□ -0.01
LTBR-202ENST00000440421 ATL3Q6DD88 541 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 CES5AQ6NT32 575 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 SLC39A4Q6P5W5 647 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 ZNF720Q7Z2F6 126 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 C3orf58Q8NDZ4 430 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 UROC1Q96N76 676 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 MSTO1Q9BUK6 570 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 ADAM7Q9H2U9 754 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 ST6GALNAC4Q9H4F1 302 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 EPHX3Q9H6B9 360 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 RXFP1Q9HBX9 757 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 PANK4Q9NVE7 773 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 DZANK1Q9NVP4 752 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 SEL1LQ9UBV2 794 aa14.99□□□□□ -0.01
LTBR-202ENST00000440421 PLXNA3P51805 1871 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 PODXLO00592 558 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 OGTO15294 1046 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 GCNT3O95395 438 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 SPATA31D3P0C874 917 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 SP100P23497 879 aaPredicted RBP14.98□□□□□ -0.01
LTBR-202ENST00000440421 BRCC3P46736 316 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 ITIH3Q06033 890 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 ELAVL2Q12926 359 aaKnown RBP14.98□□□□□ -0.01
LTBR-202ENST00000440421 TMC5Q6UXY8 1006 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 SPATA31D4Q6ZUB0 917 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 TMEM130Q8N3G9 435 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 IQUBQ8NA54 791 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 FEZF2Q8TBJ5 459 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 TTPALQ9BTX7 342 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 PHF7Q9BWX1 381 aaPredicted RBP14.98□□□□□ -0.01
LTBR-202ENST00000440421 TNMDQ9H2S6 317 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.98□□□□□ -0.01
LTBR-202ENST00000440421 FAM13BQ9NYF5 915 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 TUBGCP4Q9UGJ1 667 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 RCOR1Q9UKL0 485 aa14.98□□□□□ -0.01
LTBR-202ENST00000440421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.97□□□□□ -0.01
LTBR-202ENST00000440421 A0A0B4J269 797 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 LACTBL1A8MY62 500 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 TMEM189-UBE2V1I3L0A0 370 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 POLR2DO15514 142 aaKnown RBP14.97□□□□□ -0.01
LTBR-202ENST00000440421 FAM189A1O60320 539 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 PPP1R37O75864 691 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 GLUD1P00367 558 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 CASP5P51878 434 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 PPP2R3AQ06190 1150 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 KCNA1Q09470 495 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 BECN1Q14457 450 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 PSMD5Q16401 504 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 CD300LGQ6UXG3 332 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 CCDC65Q8IXS2 484 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 LNX1Q8TBB1 728 aaPredicted RBP14.97□□□□□ -0.01
LTBR-202ENST00000440421 HVCN1Q96D96 273 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 FAM212AQ96EL1 285 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 KIF12Q96FN5 646 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
LTBR-202ENST00000440421 FGFBP2Q9BYJ0 223 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 LRRC27Q9C0I9 530 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 CUEDC2Q9H467 287 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 SFXN1Q9H9B4 322 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 RPF1Q9H9Y2 349 aaKnown RBP14.97□□□□□ -0.01
LTBR-202ENST00000440421 MAN1C1Q9NR34 630 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 FNIP2Q9P278 1114 aa14.97□□□□□ -0.01
LTBR-202ENST00000440421 NCOR1O75376 2440 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 TTC26A0AVF1 554 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 FRMD3A2A2Y4 597 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 TKTP29401 623 aaKnown RBP14.96□□□□□ -0.01
LTBR-202ENST00000440421 ACOT2P49753 483 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 ASIC1P78348 528 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 CREMQ03060 361 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 PDCD11Q14690 1871 aaKnown RBP14.96□□□□□ -0.01
LTBR-202ENST00000440421 ENOX2Q16206 610 aaKnown RBP14.96□□□□□ -0.01
LTBR-202ENST00000440421 KYAT1Q16773 422 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 L1TD1Q5T7N2 865 aaKnown RBP14.96□□□□□ -0.01
LTBR-202ENST00000440421 RESP18Q5W5W9 173 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 ADALQ6DHV7 355 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 SLFN12LQ6IEE8 588 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.96□□□□□ -0.01
LTBR-202ENST00000440421 RNF135Q8IUD6 432 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 GPR65Q8IYL9 337 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 PIK3R5Q8WYR1 880 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 HPS3Q969F9 1004 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 RIPOR3Q96MK2 946 aa14.96□□□□□ -0.01
LTBR-202ENST00000440421 ACCSQ96QU6 501 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms