RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PYM1Q9BRP8 204 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 TARS2Q9BW92 718 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 TRIM9Q9C026 710 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 TNMDQ9H2S6 317 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 RC3H2Q9HBD1 1191 aaKnown RBP8.2□□□□□ -1.1
COPS3-203ENST00000439936 TBC1D7Q9P0N9 293 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 DOLKQ9UPQ8 538 aa8.2□□□□□ -1.1
COPS3-203ENST00000439936 FRMD3A2A2Y4 597 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 RFXAPO00287 272 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 LILRA1O75019 489 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 GADD45BO75293 160 aaPredicted RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 TBCAO75347 108 aaKnown RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 OFD1O75665 1012 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 NPTXRO95502 500 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 GAP43P17677 238 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 CTSOP43234 321 aaPredicted RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 SCTRP47872 440 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 RAB27AP51159 221 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 ERVK-21P61565 698 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 GTF2BQ00403 316 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 STRN3Q13033 797 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 CUL4BQ13620 913 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 BTG3Q14201 252 aaPredicted RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 GRIN2CQ14957 1233 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 CLLU1OSQ5K130 101 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 ATF7IP2Q5U623 682 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 FAM178BQ8IXR5 827 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 CCDC65Q8IXS2 484 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 FIBCD1Q8N539 461 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 CNNM3Q8NE01 707 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 ENGASEQ8NFI3 743 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 NANOS1Q8WY41 292 aaKnown RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 KCNN1Q92952 543 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 PGBD4Q96DM1 585 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 CCDC51Q96ER9 411 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 STRA6Q9BX79 667 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 TMEM117Q9H0C3 514 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 BLZF1Q9H2G9 400 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 ST6GALNAC4Q9H4F1 302 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 PDZD7Q9H5P4 517 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 CERS4Q9HA82 394 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 MAGEF1Q9HAY2 307 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 PTPRHQ9HD43 1115 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 TYW1Q9NV66 732 aaKnown RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 MIOSQ9NXC5 875 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 MTMR10Q9NXD2 777 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 SEL1LQ9UBV2 794 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 USP25Q9UHP3 1055 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 TBX20Q9UMR3 447 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 TNFSF13BQ9Y275 285 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 HES2Q9Y543 173 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 IPPQ9Y573 584 aa8.19□□□□□ -1.1
COPS3-203ENST00000439936 DNMT3AQ9Y6K1 912 aaPredicted RBP8.19□□□□□ -1.1
COPS3-203ENST00000439936 NLRC5Q86WI3 1866 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 PHLPP2Q6ZVD8 1323 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CNTNAP2Q9UHC6 1331 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 PVALEFA0A1B0GWK0 134 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 H0YCG3 227 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 N4BP3O15049 544 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 KLRC4O43908 158 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 LINC00271P0C7V0 271 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 ITGA4P13612 1032 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 BMPR1AP36894 532 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 AFF1P51825 1210 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 ASIC1P78348 528 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 RELBQ01201 579 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 PTSQ03393 145 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 SNW1Q13573 536 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 NCOA4Q13772 614 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 KRBA2Q6ZNG9 492 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CLEC17AQ6ZS10 378 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 LRRC55Q6ZSA7 311 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CMTR2Q8IYT2 770 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 FMR1NBQ8N0W7 255 aaPredicted RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 HELQQ8TDG4 1101 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CLP1Q92989 425 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 HPS3Q969F9 1004 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 TGS1Q96RS0 853 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 ADPGKQ9BRR6 497 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 C17orf80Q9BSJ5 609 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 TCHPQ9BT92 498 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 APOL6Q9BWW8 343 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 MRPL4Q9BYD3 311 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 FGFBP2Q9BYJ0 223 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 TRIM6Q9C030 488 aaPredicted RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 NXF3Q9H4D5 531 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 PRDM12Q9H4Q4 367 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 CWH43Q9H720 699 aa8.18□□□□□ -1.1
COPS3-203ENST00000439936 MRPL44Q9H9J2 332 aaKnown RBP8.18□□□□□ -1.1
COPS3-203ENST00000439936 TDRD15B5MCY1 1934 aaKnown RBP8.17□□□□□ -1.1
COPS3-203ENST00000439936 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
COPS3-203ENST00000439936 LAMA3Q16787 3333 aa8.17□□□□□ -1.1
COPS3-203ENST00000439936 EPOPA6NHQ4 379 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms