RNA–Protein interactions for RNA: ENST00000439890.3

NANOGP9-201, Transcript of Nanog homeobox pseudogene 9, humanhuman

BASIC

Gene NANOGP9, Length 892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP9-201ENST00000439890 MX1P20591 662 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 MSX2P35548 267 aaPredicted RBP6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 PDE1AP54750 535 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 HHEXQ03014 270 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 ARHGAP44Q17R89 818 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 TTC22Q5TAA0 569 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 ZCCHC8Q6NZY4 707 aaKnown RBP6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 LMBR1LQ6UX01 489 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 RNF207Q6ZRF8 634 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 C16orf71Q8IYS4 520 aaPredicted RBP6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 CHST14Q8NCH0 376 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 TMEM176AQ96HP8 235 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 UTP14AQ9BVJ6 771 aaKnown RBP6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 TRMT112Q9UI30 125 aaKnown RBP6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 HS3ST3A1Q9Y663 406 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 SALL3Q9BXA9 1300 aa6.91□□□□□ -1.3
NANOGP9-201ENST00000439890 RGPD3A6NKT7 1758 aaPredicted RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 LAMB2P55268 1798 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 RGPD4Q7Z3J3 1758 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 H7C1D1 291 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 GLRX3O76003 335 aaKnown RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 CIAO1O76071 339 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 GPTP24298 496 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 CCDC57Q2TAC2 916 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 TRIM68Q6AZZ1 485 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 CC2D1AQ6P1N0 951 aaPredicted RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 CFHR4Q92496 578 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 EDAQ92838 391 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 GPATCH3Q96I76 525 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 UPF2Q9HAU5 1272 aaKnown RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 GPR108Q9NPR9 543 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 MAGEL2Q9UJ55 1249 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 PA2G4Q9UQ80 394 aaKnown RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 NIP7Q9Y221 180 aaKnown RBP eCLIP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 TNPO3Q9Y5L0 923 aaKnown RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 TTC41PQ6P2S7 1318 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 UBN2Q6ZU65 1347 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 SH3TC1Q8TE82 1336 aa6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 USP42Q9H9J4 1324 aaKnown RBP6.9□□□□□ -1.3
NANOGP9-201ENST00000439890 TUBGCP6Q96RT7 1819 aa6.9□□□□□ -1.31
NANOGP9-201ENST00000439890 UBR3Q6ZT12 1888 aa6.9□□□□□ -1.31
NANOGP9-201ENST00000439890 ERC2O15083 957 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 CDC45O75419 566 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 ASLP04424 464 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 RFC4P35249 363 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 FLT3P36888 993 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 IL15P40933 162 aaPredicted RBP6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 SLC6A3Q01959 620 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 ROM1Q03395 351 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 IFIT5Q13325 482 aaKnown RBP6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 ADAM15Q13444 863 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 ZNF174Q15697 407 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 PIK3R6Q5UE93 754 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 PRAMEF9Q5VWM5 478 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 SUSD4Q5VX71 490 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 Q8N1X5 172 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 SHCBP1Q8NEM2 672 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 OTUD7AQ8TE49 926 aaPredicted RBP6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 FOXB1Q99853 325 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 NYXQ9GZU5 481 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 IL1RAPL2Q9NP60 686 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 RGS17Q9UGC6 210 aaPredicted RBP6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 C4AP0C0L4 1744 aa6.89□□□□□ -1.31
NANOGP9-201ENST00000439890 AK9Q5TCS8 1911 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 COL24A1Q17RW2 1714 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 DDX60Q8IY21 1712 aaKnown RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 RTL9Q8NET4 1388 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 UBA6A0AVT1 1052 aaPredicted RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 ANKRD18BA2A2Z9 1011 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 EYA2O00167 538 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 CYR61O00622 381 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SLC26A4O43511 780 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 NTSR2O95665 410 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 IFIT2P09913 472 aaKnown RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 GSPT1P15170 499 aaKnown RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 FNTBP49356 437 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 HMGA2P52926 109 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 ZNF460Q14592 562 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 GRM7Q14831 915 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 TXNRD1Q16881 649 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 FNDC3BQ53EP0 1204 aaKnown RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SLC10A5Q5PT55 438 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SLFN12LQ6IEE8 588 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 CASC1Q6TDU7 716 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 UBE2R2Q712K3 238 aaPredicted RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 RTN4RL1Q86UN2 441 aaPredicted RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SGMS1Q86VZ5 419 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 D2HGDHQ8N465 521 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 ZNF808Q8N4W9 903 aaPredicted RBP6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 CLUHP3Q96NS8 147 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SORCS2Q96PQ0 1159 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 NELFAQ9H3P2 528 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 MSL2Q9HCI7 577 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 PLA2G3Q9NZ20 509 aa6.88□□□□□ -1.31
NANOGP9-201ENST00000439890 SAE1Q9UBE0 346 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms