RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OFD1O75665 1012 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 TNNC2P02585 160 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 TMEM191BP0C7N4 346 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 SYN1P17600 705 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 MLH1P40692 756 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 MXI1P50539 228 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 UBASH3AP57075 661 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 DLG4P78352 724 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 GRIK3Q13003 919 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 ZACNQ401N2 412 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 KRT39Q6A163 491 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 ABI1Q8IZP0 508 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 PHOSPHO2Q8TCD6 241 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 PPP1R10Q96QC0 940 aaKnown RBP13.72□□□□□ -0.21
SCLT1-202ENST00000439369 MRPL9Q9BYD2 267 aaKnown RBP13.72□□□□□ -0.21
SCLT1-202ENST00000439369 TMEM117Q9H0C3 514 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 VPS16Q9H269 839 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 COQ4Q9Y3A0 265 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 TET1Q8NFU7 2136 aa13.72□□□□□ -0.21
SCLT1-202ENST00000439369 A0A1W2PQC6 194 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 CARNS1A5YM72 827 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 PTGESO14684 152 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 C4BPAP04003 597 aaKnown RBP13.71□□□□□ -0.21
SCLT1-202ENST00000439369 THP07101 528 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 NFICP08651 508 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 TRIM49P0CI25 452 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 TRIM49CP0CI26 452 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 ACRP10323 421 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 PAX3P23760 479 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 WNT7BP56706 349 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 MYL7Q01449 175 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 NR1I3Q14994 352 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 SV2AQ7L0J3 742 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 RNF169Q8NCN4 708 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 LPPQ93052 612 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 UROC1Q96N76 676 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 ERGIC2Q96RQ1 377 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 SLC9A7Q96T83 725 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 GAD1Q99259 594 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCLT1-202ENST00000439369 RNF19AQ9NV58 838 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 IFNKQ9P0W0 207 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 DAAM1Q9Y4D1 1078 aa13.71□□□□□ -0.21
SCLT1-202ENST00000439369 CITO14578 2027 aa13.71□□□□□ -0.22
SCLT1-202ENST00000439369 TTC3P53804 2025 aa13.71□□□□□ -0.22
SCLT1-202ENST00000439369 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 PTPRJQ12913 1337 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 ANK1P16157 1881 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 DGKIO75912 1065 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 RPL9P32969 192 aaKnown RBP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 GCLMP48507 274 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 EPHB4P54760 987 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 TFAMQ00059 246 aaKnown RBP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 CLLU1OSQ5K130 101 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 GBP6Q6ZN66 633 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 TRAPPC11Q7Z392 1133 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 FBXL13Q8NEE6 735 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 TAF4BQ92750 862 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 IQCDQ96DY2 449 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 MRFAP1L1Q96HT8 127 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 FAXDC2Q96IV6 333 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 ZFP42Q96MM3 310 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 ZMAT2Q96NC0 199 aaKnown RBP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
SCLT1-202ENST00000439369 TRIM5Q9C035 493 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
SCLT1-202ENST00000439369 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 PHACTR2O75167 634 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 FGFR1P11362 822 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 LRPAP1P30533 357 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 ATICP31939 592 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 MAGEA10P43363 369 aaPredicted RBP13.69□□□□□ -0.22
SCLT1-202ENST00000439369 SCNN1GP51170 649 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 UBXN1Q04323 297 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 TUSC3Q13454 348 aa13.69□□□□□ -0.22
SCLT1-202ENST00000439369 BIRC3Q13489 604 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms