RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 EHMT1Q9H9B1 1298 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 ARHGEF38Q9NXL2 777 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.27
DHFR-201ENST00000439211 ASIC3Q9UHC3 531 aa16.77■□□□□ 0.27
DHFR-201ENST00000439211 BCL9LQ86UU0 1499 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 ROBO3Q96MS0 1386 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 H0YGN5 161 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 DCTN3O75935 186 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 CBX6O95503 412 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 CCDC62Q6P9F0 684 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 SYT2Q8N9I0 419 aaPredicted RBP16.76■□□□□ 0.27
DHFR-201ENST00000439211 GANQ9H2C0 597 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 KCTD10Q9H3F6 313 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 NFS1Q9Y697 457 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 KRT5P13647 590 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
DHFR-201ENST00000439211 SOX5P35711 763 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 GCLMP48507 274 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 COG2Q14746 738 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 ZNF554Q86TJ5 538 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 SRRM1Q8IYB3 904 aaKnown RBP16.76■□□□□ 0.27
DHFR-201ENST00000439211 MYLK2Q9H1R3 596 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 R3HDM2Q9Y2K5 976 aaKnown RBP16.76■□□□□ 0.27
DHFR-201ENST00000439211 PITPNM2Q9BZ72 1349 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 TCP10L2B9ZVM9 353 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 FAM86B1E9PN63 330 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 DNAJC6O75061 913 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 NDUFB10O96000 172 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 FAM86B2P0C5J1 330 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 MMP13P45452 471 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 ZBTB8BQ8NAP8 495 aaPredicted RBP16.76■□□□□ 0.27
DHFR-201ENST00000439211 FAM20AQ96MK3 541 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 ZNF577Q9BSK1 485 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
DHFR-201ENST00000439211 BTBD7Q9P203 1132 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 ZFP69BQ9UJL9 534 aa16.76■□□□□ 0.27
DHFR-201ENST00000439211 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 DYTNA2CJ06 578 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 GOLGA8IPA6NC78 632 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 GOLGA8JA6NMD2 632 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 MSH4O15457 936 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 CCDC166P0CW27 439 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 GAP43P17677 238 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 IGBP1P78318 339 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 LIN52Q52LA3 116 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 FYB2Q5VWT5 728 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 DNAJC14Q6Y2X3 702 aaPredicted RBP16.75■□□□□ 0.27
DHFR-201ENST00000439211 IRF2BP2Q7Z5L9 587 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 SPATA16Q9BXB7 569 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 ANGPTL2Q9UKU9 493 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 ITGB4P16144 1822 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 TRIM43BA6NCK2 446 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 POLR2MP0CAP2 368 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 STRN3Q13033 797 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 WASHC2DQ5SRD0 308 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 NSMFQ6X4W1 530 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 RFFLQ8WZ73 363 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 ABHD8Q96I13 439 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 PFDN4Q9NQP4 134 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 DDX3XO00571 662 aaKnown RBP eCLIP16.75■□□□□ 0.271e-12■■■□□ 17
DHFR-201ENST00000439211 ADCY3O60266 1144 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 ZNF24P17028 368 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 CNGA2Q16280 664 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 OR52E8Q6IFG1 317 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 ARHGAP24Q8N264 748 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 ATXN2LQ8WWM7 1075 aaKnown RBP16.75■□□□□ 0.27
DHFR-201ENST00000439211 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 SLITRK6Q9H5Y7 841 aa16.75■□□□□ 0.27
DHFR-201ENST00000439211 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
DHFR-201ENST00000439211 ITGA2BP08514 1039 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 FMO5P49326 533 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 RBM46Q8TBY0 533 aaKnown RBP16.74■□□□□ 0.27
DHFR-201ENST00000439211 DENND2DQ9H6A0 471 aaPredicted RBP16.74■□□□□ 0.27
DHFR-201ENST00000439211 WDR37Q9Y2I8 494 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 PCDHAC2Q9Y5I4 1007 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 A6NJR5 290 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 KRT36O76013 467 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 HSP90AA5PQ58FG0 334 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 ATP11CQ8NB49 1132 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 INTS2Q9H0H0 1204 aaKnown RBP16.74■□□□□ 0.27
DHFR-201ENST00000439211 THAP2Q9H0W7 228 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 CACNA1SQ13698 1873 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 EYA4O95677 639 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 VAV1P15498 845 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 TMED10P49755 219 aaKnown RBP16.74■□□□□ 0.27
DHFR-201ENST00000439211 KCTD21Q4G0X4 260 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 PHC3Q8NDX5 983 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 DCAF4Q8WV16 495 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 ZNF333Q96JL9 665 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 ZNF184Q99676 751 aaPredicted RBP16.74■□□□□ 0.27
DHFR-201ENST00000439211 SEMA4AQ9H3S1 761 aa16.74■□□□□ 0.27
DHFR-201ENST00000439211 CFAP69A5D8W1 941 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 RINT1Q6NUQ1 792 aa16.73■□□□□ 0.27
DHFR-201ENST00000439211 IZUMO2Q6UXV1 221 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms