RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 PAAF1Q9BRP4 392 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 GOLGA2P5Q9HBQ8 144 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 MARCH5Q9NX47 278 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 TUBGCP4Q9UGJ1 667 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 COL6A3P12111 3177 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 VWA8A3KMH1 1905 aa18.38■□□□□ 0.53
TARDBP-203ENST00000439080 F8W810 466 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 CSPG5O95196 566 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 NR3C1P04150 777 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 NFICP08651 508 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 FOSL2P15408 326 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 BMP6P22004 513 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 POU5F1Q01860 360 aaKnown RBP18.37■□□□□ 0.53
TARDBP-203ENST00000439080 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 SNRNP35Q16560 246 aaKnown RBP18.37■□□□□ 0.53
TARDBP-203ENST00000439080 JADE1Q6IE81 842 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 CBWD2Q8IUF1 395 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 CD302Q8IX05 232 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 XXYLT1Q8NBI6 393 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 RABGGTAQ92696 567 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 IGSF21Q96ID5 467 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 FBXL18Q96ME1 805 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 TRAF3IP3Q9Y228 551 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 FAN1Q9Y2M0 1017 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 TSC2P49815 1807 aa18.37■□□□□ 0.53
TARDBP-203ENST00000439080 IL18RAPO95256 599 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 ALDH2P05091 517 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 WNT7BP56706 349 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 STIM1Q13586 685 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 HSP90AA2PQ14568 343 aaPredicted RBP18.36■□□□□ 0.53
TARDBP-203ENST00000439080 TMEM132DQ14C87 1099 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 ZCWPW2Q504Y3 356 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 ADSSL1Q8N142 457 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 TRIML1Q8N9V2 468 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 SPPL3Q8TCT6 385 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 POF1BQ8WVV4 589 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 ASB7Q9H672 318 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 KIAA1586Q9HCI6 787 aa18.36■□□□□ 0.53
TARDBP-203ENST00000439080 PRRC2BQ5JSZ5 2229 aaKnown RBP18.35■□□□□ 0.53
TARDBP-203ENST00000439080 ZNF233A6NK53 670 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
TARDBP-203ENST00000439080 EXOC3O60645 756 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 KIF4AO95239 1232 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
TARDBP-203ENST00000439080 IGFBP4P22692 258 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 DNAJB1P25685 340 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 CLCNKBP51801 687 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 KRT17Q04695 432 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 UBE3AQ05086 875 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 PTPROQ16827 1216 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 SLC9A9Q8IVB4 645 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 EFCAB13Q8IY85 973 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 TMEM130Q8N3G9 435 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 HASPINQ8TF76 798 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 TMEM174Q8WUU8 243 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 UROC1Q96N76 676 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 TSPAN18Q96SJ8 248 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 LMAN2LQ9H0V9 348 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
TARDBP-203ENST00000439080 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 DERAQ9Y315 318 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 C2CD2Q9Y426 696 aa18.35■□□□□ 0.53
TARDBP-203ENST00000439080 PRUNE2Q8WUY3 3088 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 PSMA7O14818 248 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 XPOTO43592 962 aaKnown RBP18.34■□□□□ 0.53
TARDBP-203ENST00000439080 NR2F2P24468 414 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 PPP1R2P41236 205 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 NFIL3Q16649 462 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 UPP1Q16831 310 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 RDH13Q8NBN7 331 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 MRPL38Q96DV4 380 aaKnown RBP18.34■□□□□ 0.53
TARDBP-203ENST00000439080 COLEC11Q9BWP8 271 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 VN1R3Q9BXE9 311 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 TLR9Q9NR96 1032 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 DMAC2Q9NW81 257 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 ADAM28Q9UKQ2 775 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.34■□□□□ 0.53
TARDBP-203ENST00000439080 SCN1AP35498 2009 aa18.34■□□□□ 0.53
TARDBP-203ENST00000439080 TRIM49BA6NDI0 452 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 PODXLO00592 558 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 GUCY2FP51841 1108 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 CYP24A1Q07973 514 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 CAMK1Q14012 370 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 MYBPC2Q14324 1141 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 ZBTB6Q15916 424 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 EDRF1Q3B7T1 1238 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 CENPPQ6IPU0 288 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 KLHL10Q6JEL2 608 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 C3orf58Q8NDZ4 430 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 TSG101Q99816 390 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 PDE11AQ9HCR9 933 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 CTNND2Q9UQB3 1225 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 MTCH2Q9Y6C9 303 aa18.33■□□□□ 0.53
TARDBP-203ENST00000439080 PPP1R3GB7ZBB8 358 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 TMEM189-UBE2V1I3L0A0 370 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 POU3F3P20264 500 aaPredicted RBP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 CYP3A5P20815 502 aa18.32■□□□□ 0.52
TARDBP-203ENST00000439080 PMS1P54277 932 aaKnown RBP18.32■□□□□ 0.52
TARDBP-203ENST00000439080 TIGD5Q53EQ6 642 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms