RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SPIRE1Q08AE8 756 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF543Q08ER8 600 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 PPP2R5EQ16537 467 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 RINT1Q6NUQ1 792 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 SPATA31D4Q6ZUB0 917 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 RHOT2Q8IXI1 618 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 GALNT15Q8N3T1 639 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 SHKBP1Q8TBC3 707 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 SNF8Q96H20 258 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 CLPTM1LQ96KA5 538 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 RBM15Q96T37 977 aaKnown RBP eCLIP14.24□□□□□ -0.138e-6■■■■■ 30.1
ACTN1-204ENST00000438964 ANAPC7Q9UJX3 599 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
ACTN1-204ENST00000438964 LIN7AO14910 233 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-204ENST00000438964 CD58P19256 250 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 ADRA1DP25100 572 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 IVDP26440 423 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 CNGA1P29973 690 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 CLK2P49760 499 aaKnown RBP14.24□□□□□ -0.13
ACTN1-204ENST00000438964 CACNB3P54284 484 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 PPP2R5CQ13362 524 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 MAPK6Q16659 721 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 ODR4Q5SWX8 454 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 IZUMO3Q5VZ72 239 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.24□□□□□ -0.135e-8■■■■■ 204.6
ACTN1-204ENST00000438964 AGGF1Q8N302 714 aaeCLIP14.24□□□□□ -0.13
ACTN1-204ENST00000438964 TEX9Q8N6V9 391 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 SCOCQ9UIL1 159 aa14.24□□□□□ -0.13
ACTN1-204ENST00000438964 AMPD1P23109 780 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 SCNN1BP51168 640 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 CCNG1P51959 295 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 SF3B3Q15393 1217 aaKnown RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 TBC1D25Q3MII6 688 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 RASIP1Q5U651 963 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 LVRNQ6Q4G3 990 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 FAM178BQ8IXR5 827 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 RBBP8NLQ8NC74 664 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 FBXO27Q8NI29 283 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 EIF2AK1Q9BQI3 630 aaKnown RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 KIAA1586Q9HCI6 787 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 AGPAT3Q9NRZ7 376 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 DIS3Q9Y2L1 958 aaKnown RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 SMCHD1A6NHR9 2005 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MIF4GDA9UHW6 222 aaKnown RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ZBTB5O15062 677 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 CDH16O75309 829 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ASMTLO95671 621 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 RALAP11233 206 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 PLS3P13797 630 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MARK3P27448 753 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ATP5DP30049 168 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 HSPA2P54652 639 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 GAD2Q05329 585 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MOGSQ13724 837 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 THOC5Q13769 683 aaKnown RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 P3H1Q32P28 736 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 HYIQ5T013 277 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 HHATQ5VTY9 493 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 C4orf50Q6ZRC1 276 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ANKS1BQ7Z6G8 1248 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 GPR75-ASB3A0A0A6YYF3 556 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 BAG2O95816 211 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ATP13A4Q4VNC1 1196 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MFSD14BQ5SR56 506 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 LRRC6Q86X45 466 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MFN1Q8IWA4 741 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MCUR1Q96AQ8 359 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 CBWD1Q9BRT8 395 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 FHDC1Q9C0D6 1143 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-204ENST00000438964 PICK1Q9NRD5 415 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ZBTB21Q9ULJ3 1066 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 ASB3Q9Y575 518 aa14.23□□□□□ -0.13
ACTN1-204ENST00000438964 MSH4O15457 936 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 KRT10P13645 584 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 ZBTB16Q05516 673 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 TRAF1Q13077 416 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 PCNX4Q63HM2 1172 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 RHBDF2Q6PJF5 856 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF365Q70YC5 407 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 HS2ST1Q7LGA3 356 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 VPS52Q8N1B4 723 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 C10orf82Q8WW14 230 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 CPA5Q8WXQ8 436 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 TTC1Q99614 292 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 GORASP1Q9BQQ3 440 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 LRRC4BQ9NT99 713 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.22□□□□□ -0.137e-7■■■■□ 25.5
ACTN1-204ENST00000438964 HEY2Q9UBP5 337 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 TMEM150BA6NC51 233 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 EEF2P13639 858 aaKnown RBP14.22□□□□□ -0.13
ACTN1-204ENST00000438964 RASSF2P50749 326 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 SCNN1DP51172 638 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 YARSP54577 528 aaKnown RBP14.22□□□□□ -0.13
ACTN1-204ENST00000438964 ZNF568Q3ZCX4 644 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 RINLQ6ZS11 566 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
ACTN1-204ENST00000438964 EPS8L1Q8TE68 723 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms