RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 HACE1Q8IYU2 909 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 LNX1Q8TBB1 728 aaPredicted RBP12.43□□□□□ -0.42
CSTF3-203ENST00000438862 CCDC51Q96ER9 411 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 MSANTD3Q96H12 275 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 ZFP42Q96MM3 310 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 PCDHGA5Q9Y5G8 931 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 PIAS3Q9Y6X2 628 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 V9GY48 417 aaPredicted RBP12.43□□□□□ -0.42
CSTF3-203ENST00000438862 CNTNAP5Q8WYK1 1306 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
CSTF3-203ENST00000438862 STBD1O95210 358 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 PTPN2P17706 415 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 PSMC3P17980 439 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 RAP1GAPP47736 663 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
CSTF3-203ENST00000438862 RAB33AQ14088 237 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 HSP90AA2PQ14568 343 aaPredicted RBP12.42□□□□□ -0.42
CSTF3-203ENST00000438862 HEATR6Q6AI08 1181 aaKnown RBP12.42□□□□□ -0.42
CSTF3-203ENST00000438862 NOTUMQ6P988 496 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 GATA6Q92908 595 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 LENG9Q96B70 501 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 SH2D3AQ9BRG2 576 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 TEKT3Q9BXF9 490 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 MINDY3Q9H8M7 445 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 VPS45Q9NRW7 570 aa12.42□□□□□ -0.42
CSTF3-203ENST00000438862 MSH4O15457 936 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 ASAP2O43150 1006 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 CHMP2AO43633 222 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 MICAL2O94851 1124 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 ERLIN2O94905 339 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 RHOP08100 348 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 IGF2RP11717 2491 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 CCNE1P24864 410 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 GDI1P31150 447 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 ZNF252P-AS1Q0IIN9 211 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 ELAVL2Q12926 359 aaKnown RBP12.41□□□□□ -0.42
CSTF3-203ENST00000438862 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 GRM2Q14416 872 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 CCDC6Q16204 474 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 LRCH2Q5VUJ6 765 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 MIER3Q7Z3K6 550 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 SGMS1Q86VZ5 419 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 CEP57Q86XR8 500 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 RAB11FIP4Q86YS3 637 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 GAB3Q8WWW8 586 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 PRPF31Q8WWY3 499 aaKnown RBP12.41□□□□□ -0.42
CSTF3-203ENST00000438862 SLC7A3Q8WY07 619 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 ZCCHC14Q8WYQ9 949 aaKnown RBP12.41□□□□□ -0.42
CSTF3-203ENST00000438862 SLC5A5Q92911 643 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 SPAG17Q6Q759 2223 aa12.41□□□□□ -0.42
CSTF3-203ENST00000438862 CCDC163A0A0D9SF12 145 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 ESYT2A0FGR8 921 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 TMEM150BA6NC51 233 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 ZNF197O14709 1029 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 ZNF263O14978 683 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 CEACAM1P13688 526 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 FCARP24071 287 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 OR1D2P34982 312 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 FUT2Q10981 343 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 SLC5A9Q2M3M2 681 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 FAM78AQ5JUQ0 283 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
CSTF3-203ENST00000438862 GSTCDQ8NEC7 633 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
CSTF3-203ENST00000438862 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 EIF2AQ9BY44 585 aaKnown RBP12.4□□□□□ -0.42
CSTF3-203ENST00000438862 TRIM6Q9C030 488 aaPredicted RBP12.4□□□□□ -0.42
CSTF3-203ENST00000438862 ZMYND12Q9H0C1 365 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 C6orf50Q9HD87 102 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
CSTF3-203ENST00000438862 HES2Q9Y543 173 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 PPME1Q9Y570 386 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 GCN1Q92616 2671 aaKnown RBP12.4□□□□□ -0.42
CSTF3-203ENST00000438862 NBEAQ8NFP9 2946 aa12.4□□□□□ -0.42
CSTF3-203ENST00000438862 COL4A2P08572 1712 aa12.4□□□□□ -0.43
CSTF3-203ENST00000438862 DSPP15924 2871 aaKnown RBP12.39□□□□□ -0.43
CSTF3-203ENST00000438862 GIPC1O14908 333 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 ADAM12O43184 909 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 RPP40O75818 363 aaKnown RBP12.39□□□□□ -0.43
CSTF3-203ENST00000438862 CEBPBP17676 345 aa12.39□□□□□ -0.43
CSTF3-203ENST00000438862 SPINK2P20155 84 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms