RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CALB1P05937 261 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 GARTP22102 1010 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 LMNB2Q03252 620 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 ITGB3BPQ13352 177 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 MYBPC2Q14324 1141 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 KCTD19Q17RG1 926 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 ICE2Q659A1 982 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 TRIM72Q6ZMU5 477 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 TAS1R2Q8TE23 839 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 PIN4Q9Y237 131 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 KRT15P19012 456 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 PCK1P35558 622 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 DGKDQ16760 1214 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 CASC4Q6P4E1 433 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 EMBQ6PCB8 327 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 NOC2LQ9Y3T9 749 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-202ENST00000438773 GBP1P32455 592 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 DSTYKQ6XUX3 929 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 SV2AQ7L0J3 742 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 PLEKHH3Q7Z736 793 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 CCDC63Q8NA47 563 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 FMO2Q99518 471 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 NACA2Q9H009 215 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 CPA4Q9UI42 421 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 DIS3Q9Y2L1 958 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 SNX24Q9Y343 169 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 CYP2C9P11712 490 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZKSCAN8Q15776 578 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 SPOUT1Q5T280 376 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 LRRC1Q9BTT6 524 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 PACSIN1Q9BY11 444 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 KCNH4Q9UQ05 1017 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 OGTO15294 1046 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 TOM1L1O75674 476 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 MAPTP10636 758 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 PSMC1P62191 440 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 ERVK-9P63128 1117 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 DEFB115Q30KQ5 88 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZNF571Q7Z3V5 609 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 SH2D3CQ8N5H7 860 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 THOC1Q96FV9 657 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 RSRC1Q96IZ7 334 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 RNPC3Q96LT9 517 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 FGFBP2Q9BYJ0 223 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 INPP5FQ9Y2H2 1132 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 CICQ96RK0 1608 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 M0QYV0 167 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 HUS1O60921 280 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 WEE2P0C1S8 567 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 UBA1P22314 1058 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 MRPS9P82933 396 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 TAOK1Q7L7X3 1001 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 DNAAF5Q86Y56 855 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 WHAMMQ8TF30 809 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 TSNARE1Q96NA8 513 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 COL20A1Q9P218 1284 aa12.31□□□□□ -0.44
TRAPPC9-202ENST00000438773 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 GOLGA8KD6RF30 607 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 EPHB6O15197 1021 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 TMEM253P0C7T8 217 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 TREML2Q5T2D2 321 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 ARMCX2Q7L311 632 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 BBOF1Q8ND07 529 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 ATP8B4Q8TF62 1192 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 MYH13Q9UKX3 1938 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 MYPNQ86TC9 1320 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 A6NNZ2 444 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 F8VZ95 297 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■■■ 61.8
TRAPPC9-202ENST00000438773 PPIL2Q13356 520 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 NNTQ13423 1086 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 TUBB8Q3ZCM7 444 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 METTL23Q86XA0 190 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 MYCBPQ99417 103 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms