RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-209ENST00000437951 FOPNLQ96NB1 174 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 APOL1O14791 398 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 CIAO1O76071 339 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 IL6P05231 212 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 STXBP2Q15833 593 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 MMADHCQ9H3L0 296 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-209ENST00000437951 MLXIPLQ9NP71 852 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 EVPLLA8MZ36 301 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 ATP6V1B1P15313 513 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 CCT8P50990 548 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 ZNF544Q6NX49 715 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 APPL2Q8NEU8 664 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 BEST2Q8NFU1 509 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 STAP1Q9ULZ2 295 aa12.11□□□□□ -0.47
PTCH1-209ENST00000437951 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 LRRC53A6NM62 1247 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 F8VZ95 297 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 TAF4O00268 1085 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ZNF18P17022 549 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 COPB2P35606 906 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ANXA11P50995 505 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 AP3M2P53677 418 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ADARP55265 1226 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 C21orf59P57076 290 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 C2CD6Q53TS8 623 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 MAGEB18Q96M61 343 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 GRID1Q9ULK0 1009 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SLC26A4O43511 780 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 GHRP10912 638 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ZNF200P98182 395 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 GADL1Q6ZQY3 521 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 LPCAT2Q7L5N7 544 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SERHL2Q9H4I8 314 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SERHLQ9NQF3 203 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 STOML2Q9UJZ1 356 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 IFNAR1P17181 557 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 TGFBR2P37173 567 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 BAG6P46379 1132 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 AIPL1Q9NZN9 384 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 LIMA1Q9UHB6 759 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 TSC22D2O75157 780 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 CNOT3O75175 753 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 TTLL1O95922 423 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 FAM58BPP0C7Q3 252 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ZYXQ15942 572 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ENKURQ8TC29 256 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 MAGED2Q9UNF1 606 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 RCAN1P53805 252 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 NCKAP1LP55160 1127 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 GFPT1Q06210 699 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 RWDD4Q6NW29 188 aaKnown RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 STKLD1Q8NE28 680 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 RMND5BQ96G75 393 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 RMI1Q9H9A7 625 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SUGCTQ9HAC7 445 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SF3B1O75533 1304 aaKnown RBP eCLIP12.1□□□□□ -0.474e-7■■■■■ 133.7
PTCH1-209ENST00000437951 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 ARSEP51690 589 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 KYAT1Q16773 422 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 MAPKAPK5Q8IW41 473 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 PPP2R3CQ969Q6 453 aa12.1□□□□□ -0.47
PTCH1-209ENST00000437951 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-209ENST00000437951 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 GNL1P36915 607 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SCTRP47872 440 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 PEX5P50542 639 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 AP1S2P56377 157 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SLC20A2Q08357 652 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 PUDPQ08623 228 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SPDYE7PQ495Y7 208 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SDE2Q6IQ49 451 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 ZFP1Q6P2D0 407 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 GSPT2Q8IYD1 628 aaKnown RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 CCDC126Q96EE4 140 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 MYO9BQ13459 2157 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 PSAPP07602 524 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 ITGB3BPQ13352 177 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-209ENST00000437951 POLA2Q14181 598 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 NANOGNBQ7Z5D8 188 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 NUP93Q8N1F7 819 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 CACNA2D2Q9NY47 1150 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 SLC9A2Q9UBY0 812 aa12.09□□□□□ -0.47
PTCH1-209ENST00000437951 RRM2P31350 389 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms