RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C11orf63Q6NUN7 778 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 EFCAB12Q6NXP0 572 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 C8orf74Q6P047 294 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 GPR142Q7Z601 462 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 WDR49Q8IV35 697 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 RASGEF1CQ8N431 466 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 METTL13Q8N6R0 699 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 TCHPQ9BT92 498 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 DOCK3Q8IZD9 2030 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 C22orf31O95567 290 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 PROZP22891 400 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 GRB14Q14449 540 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 TSHZ1Q6ZSZ6 1077 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 RNPEPQ9H4A4 650 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 STIM2Q9P246 746 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 CTTNBP2NLQ9P2B4 639 aa27.6■■■□□ 2.01
CPNE1-216ENST00000437340 TTLL13PA6NNM8 815 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 ABLIM1O14639 778 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 MAGEB2O15479 319 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 KRT5P13647 590 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 TBXAS1P24557 533 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-216ENST00000437340 TM4SF4P48230 202 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 PTENP60484 403 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 SMYD5Q6GMV2 418 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 TRAPPC12Q8WVT3 735 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.59■■■□□ 2.014e-13■■■■■ 56.2
CPNE1-216ENST00000437340 ACP6Q9NPH0 428 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 COG5Q9UP83 839 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 PCDHB2Q9Y5E7 798 aa27.59■■■□□ 2.01
CPNE1-216ENST00000437340 PGRMC1O00264 195 aaKnown RBP27.58■■■□□ 2.01
CPNE1-216ENST00000437340 TNFRSF8P28908 595 aa27.58■■■□□ 2.01
CPNE1-216ENST00000437340 TNNC1P63316 161 aa27.58■■■□□ 2.01
CPNE1-216ENST00000437340 CUL2Q13617 745 aa27.58■■■□□ 2.01
CPNE1-216ENST00000437340 GTF3C4Q9UKN8 822 aa27.58■■■□□ 2.01
CPNE1-216ENST00000437340 TTC7AQ9ULT0 858 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-216ENST00000437340 COL1A2P08123 1366 aa27.58■■■□□ 2.01
CPNE1-216ENST00000437340 CEP104O60308 925 aa27.58■■■□□ 2
CPNE1-216ENST00000437340 HARSP12081 509 aaKnown RBP27.58■■■□□ 2
CPNE1-216ENST00000437340 MAPK4P31152 587 aa27.58■■■□□ 2
CPNE1-216ENST00000437340 MPZL3Q6UWV2 235 aa27.58■■■□□ 2
CPNE1-216ENST00000437340 DPP9Q86TI2 863 aa27.58■■■□□ 2
CPNE1-216ENST00000437340 PTPRHQ9HD43 1115 aa27.58■■■□□ 2
CPNE1-216ENST00000437340 DMGDHQ9UI17 866 aaKnown RBP27.58■■■□□ 2
CPNE1-216ENST00000437340 CPSF3Q9UKF6 684 aaKnown RBP27.58■■■□□ 2
CPNE1-216ENST00000437340 PPFIA4O75335 1185 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 SNAI1O95863 264 aaPredicted RBP27.57■■■□□ 2
CPNE1-216ENST00000437340 CYP1A2P05177 515 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 INSRRP14616 1297 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 CASP8Q14790 479 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 ACAD10Q6JQN1 1059 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 C17orf99Q6UX52 265 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 ZBTB33Q86T24 672 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 OR5B17Q8NGF7 314 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 FAM84AQ96KN4 292 aa27.57■■■□□ 2
CPNE1-216ENST00000437340 CLCN3P51790 818 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 CRHR2Q13324 411 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 NCOA4Q13772 614 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 CLEC16AQ2KHT3 1053 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 ATF7IP2Q5U623 682 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 PLEKHH3Q7Z736 793 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 HDAC7Q8WUI4 952 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 MAML3Q96JK9 1138 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 NLRP4Q96MN2 994 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 CARD9Q9H257 536 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 VIPAS39Q9H9C1 493 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 APOBEC3GQ9HC16 384 aaKnown RBP27.56■■■□□ 2
CPNE1-216ENST00000437340 ZFYVE28Q9HCC9 887 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 CREBZFQ9NS37 354 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 MGAMO43451 1857 aa27.56■■■□□ 2
CPNE1-216ENST00000437340 MIF4GDA9UHW6 222 aaKnown RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 DDX3YO15523 660 aaKnown RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 PHACTR2O75167 634 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 CLTAP09496 248 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 ACO1P21399 889 aaKnown RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 TNFSF9P41273 254 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 ADCYAP1R1P41586 468 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 GPS2Q13227 327 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 IFNLR1Q8IU57 520 aaPredicted RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 LINC01465Q8N7H1 131 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 AFG1LQ8WV93 481 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 RPS6KC1Q96S38 1066 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 IMPG2Q9BZV3 1241 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 UVRAGQ9P2Y5 699 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 CNTN6Q9UQ52 1028 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 TNFSF13BQ9Y275 285 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 INO80B-WBP1J3KQ70 363 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 AOC2O75106 756 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 ZMYND10O75800 440 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 ECM2O94769 699 aaPredicted RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 NOP14P78316 857 aaKnown RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 MBTD1Q05BQ5 628 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 SMC1AQ14683 1233 aaKnown RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 CLUL1Q15846 466 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 FAM187BQ17R55 369 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 SEZ6Q53EL9 994 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 GJC2Q5T442 439 aaPredicted RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 ELMO3Q96BJ8 720 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 INO80BQ9C086 356 aaPredicted RBP27.55■■■□□ 2
CPNE1-216ENST00000437340 ABHD16BQ9H3Z7 469 aa27.55■■■□□ 2
CPNE1-216ENST00000437340 PRMT7Q9NVM4 692 aaPredicted RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms