RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 ECI2O75521 394 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 RHOP08100 348 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 SDHBP21912 280 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 FOSBP53539 338 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 CATSPER3Q86XQ3 398 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 ZBTB44Q8NCP5 570 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 DEPTORQ8TB45 409 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 CLDN23Q96B33 292 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 NACC1Q96RE7 527 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 TUFT1Q9NNX1 390 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-207ENST00000435083 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 TRAPPC3O43617 180 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 MED24O75448 989 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 LRG1P02750 347 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 EDN1P05305 212 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 PTPN2P17706 415 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 ELF1P32519 619 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 BRCC3P46736 316 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 CLCNKBP51801 687 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 SLC5A9Q2M3M2 681 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 TANGO2Q6ICL3 276 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 ANKS3Q6ZW76 656 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 NECAB1Q8N987 351 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 EPC1Q9H2F5 836 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 TMEM60Q9H2L4 133 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 GDE1Q9NZC3 331 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 USP18Q9UMW8 372 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 BACE2Q9Y5Z0 518 aa12.77□□□□□ -0.36
CHRNA1-207ENST00000435083 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 PRRG1O14668 218 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 LILRB5O75023 590 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 CEBPBP17676 345 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 NAMPTP43490 491 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 RPS9P46781 194 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 ATXN1P54253 815 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 ARPP19P56211 112 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 ADCY1Q08828 1119 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 DCAF4L1Q3SXM0 396 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 PADI6Q6TGC4 694 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 UROC1Q96N76 676 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 CNTNAP3BQ96NU0 1288 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 PPP1R10Q96QC0 940 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 CORO1BQ9BR76 489 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 CNTNAP3Q9BZ76 1288 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 BRD9Q9H8M2 597 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 POLD4Q9HCU8 107 aa12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 CDV3Q9UKY7 258 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-207ENST00000435083 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 CYP11B2P19099 503 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 MCM7P33993 719 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 ROR1Q01973 937 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 LMNB2Q03252 620 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 MTAPQ13126 283 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 FZD5Q13467 585 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 TRIM29Q14134 588 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 GRM2Q14416 872 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 PPP2R5AQ15172 486 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 UPP1Q16831 310 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 POTEHQ6S545 545 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 CD300LGQ6UXG3 332 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 C3orf58Q8NDZ4 430 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 NELL1Q92832 810 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 KIFC3Q9BVG8 833 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 GMEB2Q9UKD1 530 aa12.76□□□□□ -0.37
CHRNA1-207ENST00000435083 TRIP11Q15643 1979 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 PRR5-ARHGAP8B1AHC4 643 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 ARHGAP8P85298 464 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 NT5DC1Q5TFE4 455 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 ZNF461Q8TAF7 563 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 ERMNQ8TAM6 284 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 DNASE1L2Q92874 299 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 TCEAL4Q96EI5 215 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 IFT74Q96LB3 600 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 AVENQ9NQS1 362 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 PRMT8Q9NR22 394 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-207ENST00000435083 DMXL1Q9Y485 3027 aa12.74□□□□□ -0.37
CHRNA1-207ENST00000435083 CEP250Q9BV73 2442 aa12.74□□□□□ -0.37
CHRNA1-207ENST00000435083 SMIM28A0A1B0GU29 152 aa12.74□□□□□ -0.37
CHRNA1-207ENST00000435083 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
CHRNA1-207ENST00000435083 DCDC2BA2VCK2 349 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms