RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 GAD1Q99259 594 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 POP1Q99575 1024 aaKnown RBP25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 NDST4Q9H3R1 872 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 MMRN2Q9H8L6 949 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 C2CD2Q9Y426 696 aa25.13■■□□□ 1.61
SMARCAL1-208ENST00000434435 PTPRJQ12913 1337 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 ARL5CA6NH57 179 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 ZBBXA8MT70 800 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 LGALS16A8MUM7 142 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 TMEM191BP0C7N4 346 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 KCNE1P15382 129 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 UBASH3AP57075 661 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 TFAMQ00059 246 aaKnown RBP25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 LMBRD2Q68DH5 695 aaPredicted RBP25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 CACTINQ8WUQ7 758 aaKnown RBP25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 ZFP42Q96MM3 310 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 TMEM8AQ9HCN3 771 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 INTS13Q9NVM9 706 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 IFNKQ9P0W0 207 aa25.12■■□□□ 1.61
SMARCAL1-208ENST00000434435 CBFA2T2O43439 604 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 XPOTO43592 962 aaKnown RBP25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 TNNC2P02585 160 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 GCLMP48507 274 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 FMO5P49326 533 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 MXI1P50539 228 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 MYL7Q01449 175 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 PPP3CAQ08209 521 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 DUOXA2Q1HG44 320 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 GLRA4Q5JXX5 417 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 ABI1Q8IZP0 508 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 URGCPQ8TCY9 931 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 HELQQ8TDG4 1101 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 ZMAT2Q96NC0 199 aaKnown RBP25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 CXCL16Q9H2A7 254 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 MTIF3Q9H2K0 278 aaKnown RBP25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 RNF19AQ9NV58 838 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 INPP5FQ9Y2H2 1132 aa25.11■■□□□ 1.61
SMARCAL1-208ENST00000434435 A0A1B0GTH6 734 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 SMIM28A0A1B0GU29 152 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 PTGESO14684 152 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 INPPL1O15357 1258 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 OFD1O75665 1012 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 TPM3P06753 285 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 FGFR1P11362 822 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 SCNN1GP51170 649 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 DEFB103AP81534 67 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 CLLU1OSQ5K130 101 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 FKBP15Q5T1M5 1219 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 CRIPAKQ8N1N5 446 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 RSPH1Q8WYR4 309 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 HERVK_113Q902F9 699 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 MTMR12Q9C0I1 747 aa25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 UBQLN1Q9UMX0 589 aaKnown RBP25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.1■■□□□ 1.61
SMARCAL1-208ENST00000434435 MAGEA10P43363 369 aaPredicted RBP25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 MRE11P49959 708 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 GRIK3Q13003 919 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 BIRC3Q13489 604 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 CBWD6Q4V339 395 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 CBWD3Q5JTY5 395 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 CBWD5Q5RIA9 395 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 KRT39Q6A163 491 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 SV2AQ7L0J3 742 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 BEST2Q8NFU1 509 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 OR5B17Q8NGF7 314 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 ZNF516Q92618 1163 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 NAP1L5Q96NT1 182 aaPredicted RBP25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 TRIM5Q9C035 493 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 TMEM117Q9H0C3 514 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 RTN4Q9NQC3 1192 aaKnown RBP25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 SLC38A7Q9NVC3 462 aa25.09■■□□□ 1.61
SMARCAL1-208ENST00000434435 P4HA2O15460 535 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 UPP2O95045 317 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 C4BPAP04003 597 aaKnown RBP25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 THP07101 528 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 CETN1Q12798 172 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 ZACNQ401N2 412 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 NOMO2Q5JPE7 1267 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 GSTCDQ8NEC7 633 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 TOP1MTQ969P6 601 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 PPP1R10Q96QC0 940 aaKnown RBP25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 XPO4Q9C0E2 1151 aaKnown RBP25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 SCN1AP35498 2009 aa25.08■■□□□ 1.61
SMARCAL1-208ENST00000434435 KIAA1671Q9BY89 1806 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 COL4A6Q14031 1691 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 GBF1Q92538 1859 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 GTPBP10A4D1E9 387 aaKnown RBP25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 PMM2O15305 246 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 AP5Z1O43299 807 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 PHACTR2O75167 634 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 RGS19P49795 217 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 AFF1P51825 1210 aaKnown RBP25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 UBXN1Q04323 297 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 ZBTB6Q15916 424 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 TDRD10Q5VZ19 366 aaKnown RBP25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 C15orf39Q6ZRI6 1047 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 FAM84AQ96KN4 292 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 MIOSQ9NXC5 875 aa25.07■■□□□ 1.6
SMARCAL1-208ENST00000434435 KANSL3Q9P2N6 904 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms