RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 SNX27Q96L92 541 aa23.92■■□□□ 1.42
RPUSD3-206ENST00000433535 UROC1Q96N76 676 aa23.92■■□□□ 1.42
RPUSD3-206ENST00000433535 TOPORSQ9NS56 1045 aaPredicted RBP23.92■■□□□ 1.42
RPUSD3-206ENST00000433535 CITO14578 2027 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 CCL16O15467 120 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 LAMP2P13473 410 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 NPR3P17342 541 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 PROZP22891 400 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 GUCY2CP25092 1073 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 OR1D2P34982 312 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 HYIQ5T013 277 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 MPZL3Q6UWV2 235 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 SLC7A14Q8TBB6 771 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 DDX27Q96GQ7 796 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 ZBTB45Q96K62 511 aaPredicted RBP23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 ZMAT2Q96NC0 199 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 TCHPQ9BT92 498 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 C17orf75Q9HAS0 396 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 ANKFY1Q9P2R3 1169 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 MTRRQ9UBK8 725 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 POLIQ9UNA4 740 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 RBM19Q9Y4C8 960 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 CDY1Q9Y6F8 540 aa23.91■■□□□ 1.42
RPUSD3-206ENST00000433535 HNRNPA1P09651 372 aaKnown RBP eCLIP23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 MCF2P10911 925 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 FSHRP23945 695 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 CLCN5P51795 746 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 CACNB1Q02641 598 aaPredicted RBP23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 XKR4Q5GH76 650 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 ALKAL1Q6UXT8 129 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 RSPO2Q6UXX9 243 aaPredicted RBP23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 SLC44A3Q8N4M1 653 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 TIPINQ9BVW5 301 aa23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.9■■□□□ 1.42
RPUSD3-206ENST00000433535 NPHP3-ACAD11A0A0J9YXS1 232 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 MEFVO15553 781 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 PI15O43692 258 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 PLS3P13797 630 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 HTR4Q13639 388 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 RAB33AQ14088 237 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 AXDND1Q5T1B0 1012 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 SYT2Q8N9I0 419 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 CDK5RAP3Q96JB5 506 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 ACAP3Q96P50 834 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 IRF2BPLQ9H1B7 796 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 UPF2Q9HAU5 1272 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 DAXXQ9UER7 740 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 NUMBLQ9Y6R0 609 aa23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 PDCD11Q14690 1871 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-206ENST00000433535 KRBA1A5PL33 1030 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 PODXLO00592 558 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 PLA2G4BP0C869 781 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 AOC1P19801 751 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 SLC12A3P55017 1021 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 STRN3Q13033 797 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 TMEM119Q4V9L6 283 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 SEZ6Q53EL9 994 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 TMEM161BQ8NDZ6 487 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 SPIRE2Q8WWL2 714 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 C18orf25Q96B23 403 aaPredicted RBP23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 SLC38A7Q9NVC3 462 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 CA14Q9ULX7 337 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 SMC3Q9UQE7 1217 aa23.88■■□□□ 1.41
RPUSD3-206ENST00000433535 ANHXE9PGG2 379 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 TRAPPC3O43617 180 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 SRFP11831 508 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 HOXA9P31269 272 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 NOLC1Q14978 699 aaKnown RBP eCLIP23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 ANKS3Q6ZW76 656 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 NTPCRQ9BSD7 190 aaKnown RBP23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 HCFC1R1Q9NWW0 138 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 CNTN3Q9P232 1028 aa23.87■■□□□ 1.41
RPUSD3-206ENST00000433535 MYH15Q9Y2K3 1946 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 XYLBO75191 536 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 TOM1L1O75674 476 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 MAPTP10636 758 aaKnown RBP23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 KCNE1P15382 129 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 ARL6IP4Q66PJ3 421 aaKnown RBP23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 GPR152Q8TDT2 470 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 NXPE3Q969Y0 559 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 WNT16Q9UBV4 365 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 CDH7Q9ULB5 785 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 BACE2Q9Y5Z0 518 aa23.86■■□□□ 1.41
RPUSD3-206ENST00000433535 GFRA3O60609 400 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 SMTNP53814 917 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 VARS2Q5ST30 1063 aaKnown RBP23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 TMEM130Q8N3G9 435 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 ITFG1Q8TB96 612 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 LRRC15Q8TF66 581 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 FGF13Q92913 245 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 FGF14Q92915 247 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 RPP25Q9BUL9 199 aaKnown RBP23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 KCND2Q9NZV8 630 aa23.85■■□□□ 1.41
RPUSD3-206ENST00000433535 NOTCH4Q99466 2003 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 MCM2P49736 904 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 ROR1Q01973 937 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 SLC10A6Q3KNW5 377 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 ARSHQ5FYA8 562 aa23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 LARP1BQ659C4 914 aaKnown RBP23.84■■□□□ 1.41
RPUSD3-206ENST00000433535 PARM1Q6UWI2 310 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms