RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RECQLP46063 649 aaPredicted RBP2.84□□□□□ -1.95
CDC40-204ENST00000431461 NEK2P51955 445 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 MANFP55145 182 aaKnown RBP2.84□□□□□ -1.95
CDC40-204ENST00000431461 RNASE9P60153 205 aaKnown RBP2.84□□□□□ -1.95
CDC40-204ENST00000431461 ERVK-21P61565 698 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 NHLH2Q02577 135 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.84□□□□□ -1.95
CDC40-204ENST00000431461 TMEM240Q5SV17 173 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 ODR4Q5SWX8 454 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 PPP4R3AQ6IN85 833 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 ARMC6Q6NXE6 501 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 XYLT1Q86Y38 959 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 SYT12Q8IV01 421 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 LMBR1Q8WVP7 490 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 RTF1Q92541 710 aaKnown RBP2.84□□□□□ -1.95
CDC40-204ENST00000431461 WASF1Q92558 559 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 ADAM2Q99965 735 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 MYL10Q9BUA6 226 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 KMT5AQ9NQR1 393 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 MKS1Q9NXB0 559 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 H2AFY2Q9P0M6 372 aaPredicted RBP2.84□□□□□ -1.95
CDC40-204ENST00000431461 TLK1Q9UKI8 766 aa2.84□□□□□ -1.95
CDC40-204ENST00000431461 MAST3O60307 1309 aa2.84□□□□□ -1.96
CDC40-204ENST00000431461 WASHC2CQ9Y4E1 1318 aa2.84□□□□□ -1.96
CDC40-204ENST00000431461 KLHL33A6NCF5 533 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SERINC4A6NH21 518 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 MARCH11A6NNE9 402 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 FAM171A2A8MVW0 826 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 RBMXL2O75526 392 aaKnown RBP2.83□□□□□ -1.96
CDC40-204ENST00000431461 PRKD3O94806 890 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SEC24DO94855 1032 aaPredicted RBP2.83□□□□□ -1.96
CDC40-204ENST00000431461 MATN4O95460 622 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 GASTP01350 101 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SPATA31D3P0C874 917 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 RBP3P10745 1247 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 DDX6P26196 483 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC40-204ENST00000431461 MGAT1P26572 445 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 CDKN1CP49918 316 aaPredicted RBP2.83□□□□□ -1.96
CDC40-204ENST00000431461 MPP3Q13368 585 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 MTMR1Q13613 665 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 TP53BP2Q13625 1128 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 HLTFQ14527 1009 aaKnown RBP eCLIP2.83□□□□□ -1.96
CDC40-204ENST00000431461 ATP2B3Q16720 1220 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 PDCD4Q53EL6 469 aaKnown RBP2.83□□□□□ -1.96
CDC40-204ENST00000431461 BRDTQ58F21 947 aaPredicted RBP2.83□□□□□ -1.96
CDC40-204ENST00000431461 BTNL9Q6UXG8 535 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SPATA31D4Q6ZUB0 917 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 PDZD4Q76G19 769 aaPredicted RBP2.83□□□□□ -1.96
CDC40-204ENST00000431461 GAB3Q8WWW8 586 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 POFUT1Q9H488 388 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SPON1Q9HCB6 807 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 TCF7L1Q9HCS4 588 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SEMA4GQ9NTN9 838 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 C14orf119Q9NWQ9 140 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 TRHDEQ9UKU6 1024 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 MAP3K2Q9Y2U5 619 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 SALL3Q9BXA9 1300 aa2.83□□□□□ -1.96
CDC40-204ENST00000431461 GOLGA6CA6NDK9 693 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 GOLGA6BA6NDN3 693 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 TBKBP1A7MCY6 615 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ELL2O00472 640 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 TEX33O43247 280 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ALDH1L1O75891 902 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 SPDEFO95238 335 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 CT47B1P0C2W7 299 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 CLEC2LP0C7M8 214 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 GOLGA6DP0CG33 693 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 AKAP5P24588 427 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ID4P47928 161 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 RARRES1P49788 294 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 APBA1Q02410 837 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 DUSP2Q05923 314 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 SRSF4Q08170 494 aaKnown RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 MUM1Q2TAK8 710 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 PLEKHG6Q3KR16 790 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 C19orf54Q5BKX5 351 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 MUM1L1Q5H9M0 696 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 FAM102AQ5T9C2 384 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 THEMIS2Q5TEJ8 643 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 CCDC181Q5TID7 509 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 EFCAB2Q5VUJ9 269 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 METRNLQ641Q3 311 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 EFCAB12Q6NXP0 572 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 PNMA8AQ86V59 439 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 ASB10Q8WXI3 467 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 CYFIP2Q96F07 1278 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ZNF496Q96IT1 587 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 DUSP26Q9BV47 211 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ADGRE3Q9BY15 652 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ASPSCR1Q9BZE9 553 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 ZNF277Q9NRM2 450 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 TOPORSQ9NS56 1045 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.82□□□□□ -1.96
CDC40-204ENST00000431461 GEMIN8Q9NWZ8 242 aaKnown RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 DNAJC28Q9NX36 388 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 GOLGA6AQ9NYA3 693 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 PRSS50Q9UI38 385 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 PNMA8BQ9ULN7 279 aaPredicted RBP2.82□□□□□ -1.96
CDC40-204ENST00000431461 ANKRD6Q9Y2G4 727 aa2.82□□□□□ -1.96
CDC40-204ENST00000431461 PPP2R3BQ9Y5P8 575 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms