RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TYRP1P17643 537 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC6A4P31645 630 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 CASRP41180 1078 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 PER3P56645 1201 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 LINC00310P59036 64 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 FMO1Q01740 532 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ACAP1Q15027 740 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 AFMIDQ63HM1 303 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 MCTP2Q6DN12 878 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 MCTP1Q6DN14 999 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 GPRIN1Q7Z2K8 1008 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 RALYLQ86SE5 291 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 RSPH3Q86UC2 560 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ADGRG2Q8IZP9 1017 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZSCAN18Q8TBC5 510 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 MDM1Q8TC05 714 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 MAML1Q92585 1016 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 NMD3Q96D46 503 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 LCORQ96JN0 433 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 CCDC138Q96M89 665 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 RIPOR3Q96MK2 946 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 PPP1R16BQ96T49 567 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 UHRF1Q96T88 793 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 NDC1Q9BTX1 674 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 UNKQ9C0B0 810 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 SENP6Q9GZR1 1112 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ARMT1Q9H993 441 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 AGO3Q9H9G7 860 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 SMURF2Q9HAU4 748 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 STARD7Q9NQZ5 370 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 TRMT13Q9NUP7 481 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 RLIMQ9NVW2 624 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 STK32BQ9NY57 414 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 PUF60Q9UHX1 559 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZDHHC8Q9ULC8 765 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 CNOT6Q9ULM6 557 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 TPCN1Q9ULQ1 816 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 DMTF1Q9Y222 760 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 A0A1W2PPL8 197 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 RHPN2P1A8MT19 583 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CXorf49A8MYA2 514 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 F8W8V4 182 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC26A4O43511 780 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CREB3O43889 395 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 NOBOXO60393 691 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC43A1O75387 559 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 TCEA3O75764 348 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CYP1A1P04798 512 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CD1AP06126 327 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 IL6STP40189 918 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 GZMKP49863 264 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 AFF3P51826 1226 aaKnown RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 BTKQ06187 659 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 TCF15Q12870 199 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 DAG1Q14118 895 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 KIF22Q14807 665 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CNGA2Q16280 664 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CSRP2Q16527 193 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 GRAMD1BQ3KR37 738 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 PABPC1LQ4VXU2 614 aaKnown RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZNF385BQ569K4 471 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 GADL1Q6ZQY3 521 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 PDZD4Q76G19 769 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 DOK3Q7L591 496 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 ENAHQ8N8S7 591 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 OR14K1Q8NGZ2 314 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 BRIX1Q8TDN6 353 aaKnown RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 ATXN2LQ8WWM7 1075 aaKnown RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 BRI3BPQ8WY22 251 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 SELENOOQ9BVL4 669 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 C1orf43Q9BWL3 253 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 WDR12Q9GZL7 423 aaKnown RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 C11orf54Q9H0W9 315 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 IL23AQ9NPF7 189 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 MOCS1Q9NZB8 636 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 COL20A1Q9P218 1284 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 PNPLA7Q6ZV29 1317 aa3.91□□□□□ -1.78
HMGB1P27-201ENST00000431429 A0A1W2PPC4 97 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 TRIM43BA6NCK2 446 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 TCAF2A6NFQ2 919 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 MROH6A6NGR9 719 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 RFXAPO00287 272 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 KPNA5O15131 536 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 GRM6O15303 877 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 NCK2O43639 380 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 FGF18O76093 207 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 FARP2O94887 1054 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 ABHD16AO95870 558 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 AHSGP02765 367 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 KITP10721 976 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 TNFSF4P23510 183 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 PTPN7P35236 360 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 PIK3CGP48736 1102 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLURP1P55000 103 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 APBA1Q02410 837 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 RIN1Q13671 783 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 TMEM95Q3KNT9 176 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 TUBB8Q3ZCM7 444 aa3.9□□□□□ -1.79
HMGB1P27-201ENST00000431429 INO80DQ53TQ3 878 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms