RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 CCDC94Q9BW85 323 aaPredicted RBP15.27■□□□□ 0.04
SEC13-211ENST00000431352 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.04
SEC13-211ENST00000431352 MRPL4Q9BYD3 311 aaKnown RBP15.27■□□□□ 0.04
SEC13-211ENST00000431352 RAB34Q9BZG1 259 aa15.27■□□□□ 0.04
SEC13-211ENST00000431352 CDT1Q9H211 546 aa15.27■□□□□ 0.04
SEC13-211ENST00000431352 SH2B1Q9NRF2 756 aaPredicted RBP15.27■□□□□ 0.04
SEC13-211ENST00000431352 TNFSF13BQ9Y275 285 aa15.27■□□□□ 0.04
SEC13-211ENST00000431352 RIF1Q5UIP0 2472 aaKnown RBP15.27■□□□□ 0.03
SEC13-211ENST00000431352 DOCK6Q96HP0 2047 aa15.27■□□□□ 0.03
SEC13-211ENST00000431352 COL4A3Q01955 1670 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 SMIM28A0A1B0GU29 152 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 HOXA9P31269 272 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 TOB1P50616 345 aaPredicted RBP15.26■□□□□ 0.03
SEC13-211ENST00000431352 ARPP19P56211 112 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 RAB33AQ14088 237 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 UPP1Q16831 310 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
SEC13-211ENST00000431352 KRT79Q5XKE5 535 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 DAW1Q8N136 415 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 ADSSL1Q8N142 457 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 IGSF22Q8N9C0 903 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 KCNG4Q8TDN1 519 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 UROC1Q96N76 676 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
SEC13-211ENST00000431352 TCHPQ9BT92 498 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 KMT5AQ9NQR1 393 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 TOPORSQ9NS56 1045 aaPredicted RBP15.26■□□□□ 0.03
SEC13-211ENST00000431352 ANKFY1Q9P2R3 1169 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 DNM3Q9UQ16 869 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 ZFP37Q9Y6Q3 630 aaPredicted RBP15.26■□□□□ 0.03
SEC13-211ENST00000431352 R4GN57 208 aa15.26■□□□□ 0.03
SEC13-211ENST00000431352 FAM186AA6NE01 2351 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 PODXLO00592 558 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 TRAPPC3O43617 180 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 LRRN2O75325 713 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 GRM5P41594 1212 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 GPC5P78333 572 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 SNW1Q13573 536 aaKnown RBP15.25■□□□□ 0.03
SEC13-211ENST00000431352 IL17AQ16552 155 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 MCTP1Q6DN14 999 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 CD300LGQ6UXG3 332 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 MTSS1LQ765P7 747 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 TAS1R3Q7RTX0 852 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 SNX27Q96L92 541 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 DRC1Q96MC2 740 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 SLC2A4RGQ9NR83 387 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 DNMT3BQ9UBC3 853 aaKnown RBP15.25■□□□□ 0.03
SEC13-211ENST00000431352 SIT1Q9Y3P8 196 aa15.25■□□□□ 0.03
SEC13-211ENST00000431352 VPS13AQ96RL7 3174 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 MYH15Q9Y2K3 1946 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 SFI1A8K8P3 1242 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 SLC16A4O15374 487 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 U2AF2P26368 475 aaKnown RBP eCLIP15.24■□□□□ 0.035e-11■■□□□ 11.9
SEC13-211ENST00000431352 ROR1Q01973 937 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 MAPK7Q13164 816 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 PDIA5Q14554 519 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 VARS2Q5ST30 1063 aaKnown RBP15.24■□□□□ 0.03
SEC13-211ENST00000431352 PHLDB3Q6NSJ2 640 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 RINT1Q6NUQ1 792 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 DTHD1Q6ZMT9 781 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 ANKS3Q6ZW76 656 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 NPAS3Q8IXF0 933 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 PJA1Q8NG27 643 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 C18orf25Q96B23 403 aaPredicted RBP15.24■□□□□ 0.03
SEC13-211ENST00000431352 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
SEC13-211ENST00000431352 PLIN2Q99541 437 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 KIF2CQ99661 725 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 SLC38A7Q9NVC3 462 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 ARHGAP28Q9P2N2 729 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 MRPS23Q9Y3D9 190 aaKnown RBP15.24■□□□□ 0.03
SEC13-211ENST00000431352 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 DMDP11532 3685 aa15.24■□□□□ 0.03
SEC13-211ENST00000431352 PRRG1O14668 218 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 LRG1P02750 347 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 UBXN2BQ14CS0 331 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 SEZ6Q53EL9 994 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 ERICH6BQ5W0A0 696 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 MPZL3Q6UWV2 235 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 ZBTB45Q96K62 511 aaPredicted RBP15.23■□□□□ 0.03
SEC13-211ENST00000431352 ACAP3Q96P50 834 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 MMTAG2Q9BU76 263 aaKnown RBP15.23■□□□□ 0.03
SEC13-211ENST00000431352 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 TRIP11Q15643 1979 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 GVINP1Q7Z2Y8 2422 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 SPTBN4Q9H254 2564 aa15.23■□□□□ 0.03
SEC13-211ENST00000431352 WDR27A2RRH5 827 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 RHOP08100 348 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 MCF2P10911 925 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 GLULP15104 373 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 CEBPBP17676 345 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 ELF1P32519 619 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 MATR3P43243 847 aaKnown RBP eCLIP15.22■□□□□ 0.03
SEC13-211ENST00000431352 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
SEC13-211ENST00000431352 STRN3Q13033 797 aa15.22■□□□□ 0.03
SEC13-211ENST00000431352 MLF2Q15773 248 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms