RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PROZP22891 400 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 FMO1Q01740 532 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 GCNT1Q02742 428 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 GRM1Q13255 1194 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 GRIK4Q16099 956 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 MARCH8Q5T0T0 291 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 MTMR12Q9C0I1 747 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 PTPRHQ9HD43 1115 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 ANK1P16157 1881 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 BRCA2P51587 3418 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 ZC3H11AO75152 810 aaKnown RBP eCLIP17.93■□□□□ 0.46
USHBP1-203ENST00000431146 CST3P01034 146 aaPredicted RBP17.93■□□□□ 0.46
USHBP1-203ENST00000431146 TMEM253P0C7T8 217 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 PDE6CP51160 858 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 OLFML2BQ68BL8 750 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 C17orf99Q6UX52 265 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 CPB2Q96IY4 423 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 ZIC5Q96T25 663 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 SETD4Q9NVD3 440 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 TMEM51Q9NW97 253 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 CPSF3Q9UKF6 684 aaKnown RBP17.93■□□□□ 0.46
USHBP1-203ENST00000431146 A0A0A6YYK5 440 aaPredicted RBP17.92■□□□□ 0.46
USHBP1-203ENST00000431146 MAGEB2O15479 319 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 ATMINO43313 823 aaPredicted RBP17.92■□□□□ 0.46
USHBP1-203ENST00000431146 PHKA2P46019 1235 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
USHBP1-203ENST00000431146 NCOA4Q13772 614 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 CCDC181Q5TID7 509 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 DAAM2Q86T65 1068 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 TMEM130Q8N3G9 435 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 RFFLQ8WZ73 363 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 CDT1Q9H211 546 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 COG5Q9UP83 839 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 NUB1Q9Y5A7 615 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 NCANO14594 1321 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 ATP8B3O60423 1300 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 SLC10A3P09131 477 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 IFI16Q16666 785 aaKnown RBP17.92■□□□□ 0.46
USHBP1-203ENST00000431146 NLRP7Q8WX94 980 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 SCLT1Q96NL6 688 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 ARGLU1Q9NWB6 273 aaPredicted RBP17.92■□□□□ 0.46
USHBP1-203ENST00000431146 TSKSQ9UJT2 592 aa17.92■□□□□ 0.46
USHBP1-203ENST00000431146 GPR25O00155 361 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 HOXD8P13378 290 aaPredicted RBP17.91■□□□□ 0.46
USHBP1-203ENST00000431146 TMOD1P28289 359 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 NOP14P78316 857 aaKnown RBP17.91■□□□□ 0.46
USHBP1-203ENST00000431146 TFAMQ00059 246 aaKnown RBP17.91■□□□□ 0.46
USHBP1-203ENST00000431146 TMEM62Q0P6H9 643 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 CRHR2Q13324 411 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 MSANTD4Q8NCY6 345 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 DDX1Q92499 740 aaKnown RBP17.91■□□□□ 0.46
USHBP1-203ENST00000431146 ISCUQ9H1K1 167 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 GNEQ9Y223 722 aaKnown RBP17.91■□□□□ 0.46
USHBP1-203ENST00000431146 COL1A2P08123 1366 aa17.91■□□□□ 0.46
USHBP1-203ENST00000431146 SPDYE4A6NLX3 237 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 BUB1BO60566 1050 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 ZNF865P0CJ78 1059 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 CXCL8P10145 99 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 FGFR4P22455 802 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 MRPS25P82663 173 aaKnown RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 CDR2Q01850 454 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 CUL2Q13617 745 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 AMHR2Q16671 573 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 TLK2Q86UE8 772 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 WDR49Q8IV35 697 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 EFCAB13Q8IY85 973 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 HINFPQ9BQA5 517 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 PRMT7Q9NVM4 692 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 GINS2Q9Y248 185 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 FAM155AB1AL88 458 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 KCNK3O14649 394 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 RTN2O75298 545 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 KIF4AO95239 1232 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 HOXC6P09630 235 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 CTGFP29279 349 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 SSTR3P32745 418 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 RPS6KA1Q15418 735 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 ENOSF1Q7L5Y1 443 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 PEX26Q7Z412 305 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 KIAA0319LQ8IZA0 1049 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 SPATA4Q8NEY3 305 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 LMBR1Q8WVP7 490 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 NFKBIZQ9BYH8 718 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 FAM49AQ9H0Q0 323 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 TNFSF13BQ9Y275 285 aa17.9■□□□□ 0.46
USHBP1-203ENST00000431146 TRIP12Q14669 1992 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-203ENST00000431146 CLTAP09496 248 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 MYL6P60660 151 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 VSNL1P62760 191 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 KIZQ2M2Z5 673 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 USP6NLQ92738 828 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 A6NJR5 290 aa17.89■□□□□ 0.45
USHBP1-203ENST00000431146 TNPO2O14787 897 aaKnown RBP17.89■□□□□ 0.45
USHBP1-203ENST00000431146 ARF4P18085 180 aaPredicted RBP17.89■□□□□ 0.45
USHBP1-203ENST00000431146 ACO1P21399 889 aaKnown RBP17.89■□□□□ 0.45
USHBP1-203ENST00000431146 BEX3Q00994 111 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms