RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.35
RIF1-204ENST00000430328 ANXA11P50995 505 aaKnown RBP17.27■□□□□ 0.35
RIF1-204ENST00000430328 CSNK2BP67870 215 aa17.27■□□□□ 0.35
RIF1-204ENST00000430328 CBFBQ13951 182 aa17.27■□□□□ 0.35
RIF1-204ENST00000430328 ESRP1Q6NXG1 681 aaKnown RBP17.27■□□□□ 0.35
RIF1-204ENST00000430328 SAMSN1Q9NSI8 373 aaKnown RBP17.27■□□□□ 0.35
RIF1-204ENST00000430328 MTFR1Q15390 333 aa17.27■□□□□ 0.35
RIF1-204ENST00000430328 ANKRD40Q6AI12 368 aa17.27■□□□□ 0.35
RIF1-204ENST00000430328 NANOGNBQ7Z5D8 188 aa17.27■□□□□ 0.35
RIF1-204ENST00000430328 RMND5BQ96G75 393 aaPredicted RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 VMP1Q96GC9 406 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 APOL4Q9BPW4 351 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 SOX11P35716 441 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 MDH1P40925 334 aaKnown RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 MACC1Q6ZN28 852 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 IL1RL2Q9HB29 575 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 KRT20P35900 424 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 SESN2P58004 480 aaPredicted RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 EFHC2Q5JST6 749 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 ZNF57Q68EA5 555 aaPredicted RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 FRMD6Q96NE9 622 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 BCL10O95999 233 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 DARSP14868 501 aaKnown RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 PRIM2P49643 509 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 BCAR1P56945 870 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 ZNF235Q14590 738 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 CCT8L2Q96SF2 557 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 PPP2R3BQ9Y5P8 575 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 ARF4P18085 180 aaPredicted RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 ARSEP51690 589 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 ZNF699Q32M78 642 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 POLG2Q9UHN1 485 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 DPYSL4O14531 572 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 HNMTP50135 292 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 KIAA0408Q6ZU52 694 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 ZBTB38Q8NAP3 1195 aaPredicted RBP17.26■□□□□ 0.35
RIF1-204ENST00000430328 SMARCAL1Q9NZC9 954 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 TMCC3Q9ULS5 477 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 DGKKQ5KSL6 1271 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 PMF1Q6P1K2 205 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 SPASTQ9UBP0 616 aa17.26■□□□□ 0.35
RIF1-204ENST00000430328 SF3B1O75533 1304 aaKnown RBP eCLIP17.25■□□□□ 0.354e-6■■■■■ 37.3
RIF1-204ENST00000430328 RGS2P41220 211 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 PTPN21Q16825 1174 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 UGP2Q16851 508 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 FBXO42Q6P3S6 717 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 DFFAO00273 331 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 MFAP3LO75121 409 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 BYSLQ13895 437 aaKnown RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 ZNF564Q8TBZ8 553 aaPredicted RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 BTN3A3O00478 584 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 PLA2G4BP0C869 781 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 TGFBR2P37173 567 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 NRG3P56975 720 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 YWHAZP63104 245 aaKnown RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 IZUMO3Q5VZ72 239 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 SLFN13Q68D06 897 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 APOL1O14791 398 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 PSMD3O43242 534 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 SDC4P31431 198 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 CHSY1Q86X52 802 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 ABHD10Q9NUJ1 306 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 CEP72Q9P209 647 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 MEI4A8MW99 385 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 ATP9BO43861 1147 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 CCDC130P13994 396 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 ATP5JP18859 108 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 CCNE1P24864 410 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 GPR1P46091 355 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 TAF2Q6P1X5 1199 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 SNX31Q8N9S9 440 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 MNTQ99583 582 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 TSEN34Q9BSV6 310 aaKnown RBP17.25■□□□□ 0.35
RIF1-204ENST00000430328 TAP1Q03518 808 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 ATP1A4Q13733 1029 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 C2CD6Q53TS8 623 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 SPANXN2Q5MJ10 180 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 C12orf60Q5U649 245 aa17.25■□□□□ 0.35
RIF1-204ENST00000430328 PTPN23Q9H3S7 1636 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 NDUFS3O75489 264 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 CLPTM1O96005 669 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 PGK2P07205 417 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 BTN3A2P78410 334 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 MTERF2Q49AM1 385 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 SIX5Q8N196 739 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 OTUD7AQ8TE49 926 aaPredicted RBP17.24■□□□□ 0.35
RIF1-204ENST00000430328 SLC10A4Q96EP9 437 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 SEC16BQ96JE7 1060 aa17.24■□□□□ 0.35
RIF1-204ENST00000430328 ZNF624Q9P2J8 865 aaPredicted RBP17.24■□□□□ 0.35
RIF1-204ENST00000430328 TNPO2O14787 897 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms