RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 VPS52Q8N1B4 723 aa11.79□□□□□ -0.52
SEMA4D-209ENST00000429836 MCUR1Q96AQ8 359 aa11.79□□□□□ -0.52
SEMA4D-209ENST00000429836 BTBD10Q9BSF8 475 aa11.79□□□□□ -0.52
SEMA4D-209ENST00000429836 C12orf65Q9H3J6 166 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-209ENST00000429836 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
SEMA4D-209ENST00000429836 LNPEPQ9UIQ6 1025 aa11.79□□□□□ -0.52
SEMA4D-209ENST00000429836 ROBO1Q9Y6N7 1651 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 TTC36A6NLP5 189 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 TCEA3O75764 348 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 ATF2P15336 505 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 KRT15P19012 456 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 RRM1P23921 792 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 EIF6P56537 245 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 USP46P62068 366 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 GPC5P78333 572 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 CD101Q93033 1021 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 LRRC19Q9H756 370 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 FBXO6Q9NRD1 293 aaPredicted RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 RHBDL2Q9NX52 303 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 EURLQ9NYK6 297 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 A0A0G2JND7 137 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 EXOC1LA0A1B0GW35 172 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 C2orf71A6NGG8 1288 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 A6NJR5 290 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 TGFB1I1O43294 461 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 CCDC22O60826 627 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 GCAP28676 217 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 CPA2P48052 419 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 ZRSR2Q15696 482 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 MAPK6Q16659 721 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 SLC45A4Q5BKX6 768 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 IZUMO2Q6UXV1 221 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 WNT8AQ9H1J5 351 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 SYNCQ9H7C4 482 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 KIAA1586Q9HCI6 787 aa11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 RPL26L1Q9UNX3 145 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 R3HDM2Q9Y2K5 976 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEMA4D-209ENST00000429836 A0A1W2PPM1 405 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 GTPBP10A4D1E9 387 aaKnown RBP11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 NTSR2O95665 410 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 IMPDH2P12268 514 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 MUTP22033 750 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 TPP2P29144 1249 aaPredicted RBP11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 PIK3CAP42336 1068 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 CYP2J2P51589 502 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 DEUP1Q05D60 604 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 LIN52Q52LA3 116 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 FBXO33Q7Z6M2 555 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 SESTD1Q86VW0 696 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 CATSPER3Q86XQ3 398 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 LRRC47Q8N1G4 583 aaKnown RBP11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 ZNF75CPQ92670 426 aaPredicted RBP11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 CCDC77Q9BR77 488 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 ASCC2Q9H1I8 757 aaPredicted RBP11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 MMADHCQ9H3L0 296 aaPredicted RBP11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 HEY2Q9UBP5 337 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 FRMPD4Q14CM0 1322 aa11.77□□□□□ -0.52
SEMA4D-209ENST00000429836 SLC16A3O15427 465 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 HNRNPRO43390 633 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 ZBED4O75132 1171 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 COQ9O75208 318 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 PIAS1O75925 651 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 HAUS5O94927 633 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 CETN2P41208 172 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 CYP4A11Q02928 519 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 SDCCAG8Q86SQ7 713 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 TXNRD3Q86VQ6 643 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 C12orf50Q8NA57 414 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 CELF1Q92879 486 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 SLC5A5Q92911 643 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 PTCD3Q96EY7 689 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 CYTH2Q99418 400 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 NUP85Q9BW27 656 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 RIOX1Q9H6W3 641 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 CYLDQ9NQC7 956 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 ACTL7BQ9Y614 415 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 ROBO3Q96MS0 1386 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 C2CD2LO14523 706 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 PLSCR1O15162 318 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 USP1O94782 785 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 CDK8P49336 464 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 STAT4Q14765 748 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 LVRNQ6Q4G3 990 aa11.77□□□□□ -0.53
SEMA4D-209ENST00000429836 ZNF564Q8TBZ8 553 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms