RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	CEP120	Q8N960	986 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	KCNG4	Q8TDN1	519 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	SPIRE2	Q8WWL2	714 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	RIN2	Q8WYP3	895 aa	Predicted RBP	19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	TARS2	Q9BW92	718 aa	Known RBP	19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	CDT1	Q9H211	546 aa		19.46	■□□□□ 0.71
MRPL28-203	ENST00000429738	SFI1	A8K8P3	1242 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	TMEM189-UBE2V1	I3L0A0	370 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	LMNA	P02545	664 aa	Known RBP	19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	PLA2G4B	P0C869	781 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	PLS3	P13797	630 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	CREM	Q03060	361 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	LRRC15	Q8TF66	581 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	HASPIN	Q8TF76	798 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	PIK3R5	Q8WYR1	880 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	KCNN1	Q92952	543 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	MYADM	Q96S97	322 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	PLEKHA4	Q9H4M7	779 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	PDCD11	Q14690	1871 aa	Known RBP	19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	CLUH	O75153	1309 aa		19.45	■□□□□ 0.7
MRPL28-203	ENST00000429738	SLC16A4	O15374	487 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	TGM5	O43548	720 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	RFPL2	O75678	378 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	BMP15	O95972	392 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	SRF	P11831	508 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	RFX1	P22670	979 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZNF568	Q3ZCX4	644 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	ARSH	Q5FYA8	562 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	GLRA4	Q5JXX5	417 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	TMEM161B	Q8NDZ6	487 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	LNX1	Q8TBB1	728 aa	Predicted RBP	19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	SMG7	Q92540	1137 aa	Known RBP	19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	PLIN2	Q99541	437 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	TTPAL	Q9BTX7	342 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	KCNG1	Q9UIX4	513 aa		19.44	■□□□□ 0.7
MRPL28-203	ENST00000429738	CACNA1I	Q9P0X4	2223 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	SMIM28	A0A1B0GU29	152 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	MCF2	P10911	925 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	RPL17	P18621	184 aa	Known RBP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	GRIN1	Q05586	938 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	RAD51AP2	Q09MP3	1159 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	ELAVL2	Q12926	359 aa	Known RBP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	UPP1	Q16831	310 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	FAM171A1	Q5VUB5	890 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	PRSS55	Q6UWB4	352 aa	Predicted RBP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	MPZL3	Q6UWV2	235 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	CD300LG	Q6UXG3	332 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	PALB2	Q86YC2	1186 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZNF707	Q96C28	371 aa	Predicted RBP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	CDK5RAP3	Q96JB5	506 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	CLSTN3	Q9BQT9	956 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	CCDC94	Q9BW85	323 aa	Predicted RBP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	TBC1D17	Q9HA65	648 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	TOPORS	Q9NS56	1045 aa	Predicted RBP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	CA14	Q9ULX7	337 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	OTOGL	Q3ZCN5	2332 aa		19.43	■□□□□ 0.7
MRPL28-203	ENST00000429738	DOCK6	Q96HP0	2047 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	MYB	P10242	640 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	MAPT	P10636	758 aa	Known RBP	19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	IGFBP6	P24592	240 aa	Predicted RBP	19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	CLCNKB	P51801	687 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	SMTN	P53814	917 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	SF3A1	Q15459	793 aa	Known RBP	19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	PHLDB3	Q6NSJ2	640 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	GLYCTK	Q8IVS8	523 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	UROC1	Q96N76	676 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	BACH2	Q9BYV9	841 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	PIDD1	Q9HB75	910 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	BLOC1S4	Q9NUP1	217 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZDHHC7	Q9NXF8	308 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	CEP250	Q9BV73	2442 aa		19.42	■□□□□ 0.7
MRPL28-203	ENST00000429738	NPHP3-ACAD11	A0A0J9YXS1	232 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	MEFV	O15553	781 aa	Predicted RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	TOM1L1	O75674	476 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	B3GAT3	O94766	335 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	SPATA31D3	P0C874	917 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	LAMP2	P13473	410 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	KCNE1	P15382	129 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	FGFR3	P22607	806 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	LONP1	P36776	959 aa	Known RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	UBA7	P41226	1012 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	YARS	P54577	528 aa	Known RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	NCKAP1L	P55160	1127 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	SOX4	Q06945	474 aa	Predicted RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	PSMD5	Q16401	504 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	DCLRE1A	Q6PJP8	1040 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZPBP2	Q6X784	338 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	SPATA31D4	Q6ZUB0	917 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	C3orf58	Q8NDZ4	430 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	GPR152	Q8TDT2	470 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZBTB45	Q96K62	511 aa	Predicted RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	ZMAT2	Q96NC0	199 aa	Known RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	GOLGA2P5	Q9HBQ8	144 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	CNTN3	Q9P232	1028 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	LARS	Q9P2J5	1176 aa	Known RBP	19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	FBXW11	Q9UKB1	542 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	ODF2L	Q9ULJ1	636 aa		19.41	■□□□□ 0.7
MRPL28-203	ENST00000429738	SIT1	Q9Y3P8	196 aa		19.41	■□□□□ 0.7

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms