RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 STAMQ92783 540 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 TMBIM4Q9HC24 238 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 MSRAQ9UJ68 235 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 LRRC53A6NM62 1247 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 DKC1O60832 514 aaKnown RBP eCLIP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 BIRC3Q13489 604 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 ECM1Q16610 540 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 INF2Q27J81 1249 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 RUFY4Q6ZNE9 571 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 SLFN12Q8IYM2 578 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 HDAC7Q8WUI4 952 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 SEPT8Q92599 483 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 ZNF689Q96CS4 500 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 AZI2Q9H6S1 392 aa10.34□□□□□ -0.75
NEDD1-203ENST00000429527 CXXC1Q9P0U4 656 aaPredicted RBP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
NEDD1-203ENST00000429527 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 LINC00271P0C7V0 271 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 ERVK-21P61565 698 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 POU5F1BQ06416 359 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 DSC3Q14574 896 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 C10orf67Q8IYJ2 551 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 SCLYQ96I15 445 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 ZIM3Q96PE6 472 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 CCDC134Q9H6E4 229 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 ELAC1Q9H777 363 aaKnown RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 ERVK-5Q9HDB9 667 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 LUC7LQ9NQ29 371 aaKnown RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 FAM169AQ9Y6X4 670 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 MYCNP04198 464 aaPredicted RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 PLEKP08567 350 aaPredicted RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 INSRRP14616 1297 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 NAP1L1P55209 391 aaKnown RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 FAM189BP81408 668 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 ZNF200P98182 395 aaPredicted RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 FKBP3Q00688 224 aaKnown RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 IKBKEQ14164 716 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 LPIN1Q14693 890 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 TNFAIP8L3Q5GJ75 292 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 DEFB123Q8N688 67 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 HAS1Q92839 578 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 CALML4Q96GE6 196 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 FAM129AQ9BZQ8 928 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 UNC45AQ9H3U1 944 aa10.33□□□□□ -0.76
NEDD1-203ENST00000429527 RBM12Q9NTZ6 932 aaKnown RBP10.33□□□□□ -0.76
NEDD1-203ENST00000429527 SLC16A3O15427 465 aaKnown RBP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 OATP04181 439 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 CCL23P55773 120 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 PCBP1Q15365 356 aaKnown RBP eCLIP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 ATP6V1G3Q96LB4 118 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 TMEM109Q9BVC6 243 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 SETD4Q9NVD3 440 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 CCDC188H7C350 402 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 EBAG9O00559 213 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 MEFVO15553 781 aaPredicted RBP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 GPR32O75388 356 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 GJB5O95377 273 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 ATP2A2P16615 1042 aaKnown RBP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 MTIF2P46199 727 aaKnown RBP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 EPHA7Q15375 998 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 FAM47CQ5HY64 1035 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 FRMD5Q7Z6J6 570 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 C4orf19Q8IY42 314 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 TOP1MTQ969P6 601 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 ADAMTS10Q9H324 1103 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 SLITRK6Q9H5Y7 841 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 NOD1Q9Y239 953 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 HSF2BPO75031 334 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 RASSF9O75901 435 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 MOCS3O95396 460 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 FAM107AO95990 144 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 AMHP03971 560 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 ACRP10323 421 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 CLUL1Q15846 466 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 IER5Q5VY09 327 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 IRF2BP2Q7Z5L9 587 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 TRIM50Q86XT4 487 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 BORCS6Q96GS4 357 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 CDX2Q99626 313 aaPredicted RBP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 RAD9AQ99638 391 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 RAB34Q9BZG1 259 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
NEDD1-203ENST00000429527 C1orf112Q9NSG2 853 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 RWDD3Q9Y3V2 267 aa10.32□□□□□ -0.76
NEDD1-203ENST00000429527 TTC3P53804 2025 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.31□□□□□ -0.76
NEDD1-203ENST00000429527 GLI1P08151 1106 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 GHRP10912 638 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 ZNF76P36508 570 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 CRYBB1P53674 252 aaPredicted RBP10.31□□□□□ -0.76
NEDD1-203ENST00000429527 DRG2P55039 364 aaKnown RBP10.31□□□□□ -0.76
NEDD1-203ENST00000429527 XKR3Q5GH77 459 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 SND1Q7KZF4 910 aaKnown RBP eCLIP10.31□□□□□ -0.76
NEDD1-203ENST00000429527 TET1Q8NFU7 2136 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 TLCD1Q96CP7 247 aa10.31□□□□□ -0.76
NEDD1-203ENST00000429527 CELF4Q9BZC1 486 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms