RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ASB7Q9H672 318 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 SLC38A7Q9NVC3 462 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 MTMR10Q9NXD2 777 aa24.25■■□□□ 1.47
PTPN18-205ENST00000428843 CARNS1A5YM72 827 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 PPP1R3GB7ZBB8 358 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 EXOC3O60645 756 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 IL18RAPO95256 599 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 PPP1R2P41236 205 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 WNT7BP56706 349 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 NFIL3Q16649 462 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 CENPPQ6IPU0 288 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 TMEM173Q86WV6 379 aaPredicted RBP24.24■■□□□ 1.47
PTPN18-205ENST00000428843 RABGGTAQ92696 567 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 PAAF1Q9BRP4 392 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 GOLGA2P5Q9HBQ8 144 aa24.24■■□□□ 1.47
PTPN18-205ENST00000428843 ALG13Q9NP73 1137 aaKnown RBP24.24■■□□□ 1.47
PTPN18-205ENST00000428843 PRG3Q9Y2Y8 225 aaPredicted RBP24.24■■□□□ 1.47
PTPN18-205ENST00000428843 TULP1O00294 542 aaPredicted RBP24.23■■□□□ 1.47
PTPN18-205ENST00000428843 PSMA7O14818 248 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 GRM6O15303 877 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 LPXNO60711 386 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 NFICP08651 508 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 PTMSP20962 102 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 MYBPC2Q14324 1141 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 ZBTB6Q15916 424 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 SNRNP35Q16560 246 aaKnown RBP24.23■■□□□ 1.47
PTPN18-205ENST00000428843 CCDC183Q5T5S1 534 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 BCL7CQ8WUZ0 217 aaPredicted RBP24.23■■□□□ 1.47
PTPN18-205ENST00000428843 DHTKD1Q96HY7 919 aaPredicted RBP24.23■■□□□ 1.47
PTPN18-205ENST00000428843 IGSF21Q96ID5 467 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 GUCD1Q96NT3 240 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 TSPAN18Q96SJ8 248 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 TUBGCP4Q9UGJ1 667 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 DERAQ9Y315 318 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 CHD7Q9P2D1 2997 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 SZT2Q5T011 3432 aa24.23■■□□□ 1.47
PTPN18-205ENST00000428843 F8W810 466 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 NR2F2P24468 414 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 CCNE1P24864 410 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 PMS1P54277 932 aaKnown RBP24.22■■□□□ 1.47
PTPN18-205ENST00000428843 PLCB3Q01970 1234 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 HSP90AA2PQ14568 343 aaPredicted RBP24.22■■□□□ 1.47
PTPN18-205ENST00000428843 TMEM132DQ14C87 1099 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 EDRF1Q3B7T1 1238 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 ANKRD40Q6AI12 368 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 KLHL10Q6JEL2 608 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 RBM43Q6ZSC3 357 aaKnown RBP24.22■■□□□ 1.47
PTPN18-205ENST00000428843 EFCAB13Q8IY85 973 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 SPPL3Q8TCT6 385 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 CDX2Q99626 313 aaPredicted RBP24.22■■□□□ 1.47
PTPN18-205ENST00000428843 TSG101Q99816 390 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 COLEC11Q9BWP8 271 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 PDE11AQ9HCR9 933 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 MARCH5Q9NX47 278 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 TMEM63CQ9P1W3 806 aa24.22■■□□□ 1.47
PTPN18-205ENST00000428843 UBQLN1Q9UMX0 589 aaKnown RBP24.22■■□□□ 1.47
PTPN18-205ENST00000428843 TRIM49BA6NDI0 452 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 CASP4P49662 377 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 CYP24A1Q07973 514 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 CEP135Q66GS9 1140 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 TMEM130Q8N3G9 435 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 MYLIPQ8WY64 445 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 TMEM169Q96HH4 297 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 UROC1Q96N76 676 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 CTNND2Q9UQB3 1225 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 C2CD2Q9Y426 696 aa24.21■■□□□ 1.47
PTPN18-205ENST00000428843 ATG2AQ2TAZ0 1938 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 XPOTO43592 962 aaKnown RBP24.2■■□□□ 1.46
PTPN18-205ENST00000428843 DNAJB1P25685 340 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 RPL13P26373 211 aaKnown RBP24.2■■□□□ 1.46
PTPN18-205ENST00000428843 CLCNKBP51801 687 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 GUCY2FP51841 1108 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 KRT17Q04695 432 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 ADAM9Q13443 819 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 ADGRE1Q14246 886 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 SPATA1Q5VX52 437 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 POF1BQ8WVV4 589 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 NELFBQ8WX92 580 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 GAS2L1Q99501 681 aaPredicted RBP24.2■■□□□ 1.46
PTPN18-205ENST00000428843 CDH23Q9H251 3354 aa24.2■■□□□ 1.46
PTPN18-205ENST00000428843 CYP3A5P20815 502 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 NLRP12P59046 1061 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 UBE3AQ05086 875 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 LRRC63Q05C16 580 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 PSMD6Q15008 389 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 UPP1Q16831 310 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 CAVIN1Q6NZI2 390 aaKnown RBP24.19■■□□□ 1.46
PTPN18-205ENST00000428843 NT5DC4Q86YG4 428 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 BEST2Q8NFU1 509 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 HASPINQ8TF76 798 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 DDX27Q96GQ7 796 aaKnown RBP24.19■■□□□ 1.46
PTPN18-205ENST00000428843 MFSD14AQ96MC6 490 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 LZTS1Q9Y250 596 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 FRMD4BQ9Y2L6 1034 aa24.19■■□□□ 1.46
PTPN18-205ENST00000428843 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.19■■□□□ 1.46
PTPN18-205ENST00000428843 PODXLO00592 558 aa24.18■■□□□ 1.46
PTPN18-205ENST00000428843 KIF4AO95239 1232 aa24.18■■□□□ 1.46
PTPN18-205ENST00000428843 IGFBP6P24592 240 aaPredicted RBP24.18■■□□□ 1.46
PTPN18-205ENST00000428843 LRPAP1P30533 357 aa24.18■■□□□ 1.46
PTPN18-205ENST00000428843 RPL9P32969 192 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms