RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 VITQ6UXI7 678 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 FAM160A2Q8N612 972 aaPredicted RBP8.94□□□□□ -0.98
CSTF1-203ENST00000428552 CCDC148Q8NFR7 591 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 TCP11Q8WWU5 503 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 BRF1Q92994 677 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 ZSWIM3Q96MP5 696 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 IER2Q9BTL4 223 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 TMEM121BQ9BXQ6 578 aaPredicted RBP8.94□□□□□ -0.98
CSTF1-203ENST00000428552 SLC26A6Q9BXS9 759 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 NFKBIZQ9BYH8 718 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 AGXT2Q9BYV1 514 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 ZNF334Q9HCZ1 680 aaPredicted RBP8.94□□□□□ -0.98
CSTF1-203ENST00000428552 TRPV5Q9NQA5 729 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 SH3GLB2Q9NR46 395 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 RYDENQ9NUL5 291 aaKnown RBP8.94□□□□□ -0.98
CSTF1-203ENST00000428552 DDX25Q9UHL0 483 aaKnown RBP8.94□□□□□ -0.98
CSTF1-203ENST00000428552 RAB23Q9ULC3 237 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 PCDHA4Q9UN74 947 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 WASF3Q9UPY6 502 aa8.94□□□□□ -0.98
CSTF1-203ENST00000428552 CCDC196A0A1B0GTZ2 297 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 ARHGEF37A1IGU5 675 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 MAN2B1O00754 1011 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 EDN1P05305 212 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 GLRA2P23416 452 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 CXCL12P48061 93 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 PTGDRQ13258 359 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 MXD4Q14582 209 aaPredicted RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 TMCO4Q5TGY1 634 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 Q6ZS52 159 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 Q6ZUG5 572 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 EXOC8Q8IYI6 725 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 FBXL16Q8N461 479 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 DAGLBQ8NCG7 672 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 FAM3CQ92520 227 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 KCNB2Q92953 911 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 RSPRY1Q96DX4 576 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 DDX27Q96GQ7 796 aaKnown RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 DYDC2Q96IM9 177 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 ASB16Q96NS5 453 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 MTRQ99707 1265 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 NCOA5Q9HCD5 579 aaKnown RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 RBM12Q9NTZ6 932 aaKnown RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 PARP2Q9UGN5 583 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 NAP1L2Q9ULW6 460 aaPredicted RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 CDY1Q9Y6F8 540 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 PIAS3Q9Y6X2 628 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 GREB1Q4ZG55 1949 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 CNOT1A5YKK6 2376 aaKnown RBP8.93□□□□□ -0.98
CSTF1-203ENST00000428552 AKAP13Q12802 2813 aa8.93□□□□□ -0.98
CSTF1-203ENST00000428552 WDR27A2RRH5 827 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 C1QTNF9BB2RNN3 333 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 TMEM189-UBE2V1I3L0A0 370 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 ABLIM3O94929 683 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 SLITRK3O94933 977 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 SEC24AO95486 1093 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 C1QTNF9P0C862 333 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 TKTP29401 623 aaKnown RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 VIPR2P41587 438 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 NLRP5P59047 1200 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 CTTNQ14247 550 aaKnown RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 EPHA7Q15375 998 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 CCDC6Q16204 474 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 INF2Q27J81 1249 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 XKR9Q5GH70 373 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 RNF20Q5VTR2 975 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 TXNDC11Q6PKC3 985 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 RTL10Q7L3V2 364 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 LONP2Q86WA8 852 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 BLIDQ8IZY5 108 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 SPEM1Q8N4L4 309 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 C3orf58Q8NDZ4 430 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 DDX1Q92499 740 aaKnown RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 AIFM3Q96NN9 605 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 TRMT61BQ9BVS5 477 aaKnown RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 TRIM6Q9C030 488 aaPredicted RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 PDZD7Q9H5P4 517 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 BRD9Q9H8M2 597 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 SH2B1Q9NRF2 756 aaPredicted RBP8.92□□□□□ -0.98
CSTF1-203ENST00000428552 SNTG2Q9NY99 539 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 USP20Q9Y2K6 914 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 BACE2Q9Y5Z0 518 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 RALGAPA1Q6GYQ0 2036 aa8.92□□□□□ -0.98
CSTF1-203ENST00000428552 I3L4J1 428 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 DKC1O60832 514 aaKnown RBP eCLIP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 RECQL4O94761 1208 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 MICAL2O94851 1124 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 KCNK5O95279 499 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 LYPLA2O95372 231 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 THP07101 528 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PTPN2P17706 415 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PSMC3P17980 439 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 CCNE1P24864 410 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 PDIA3P30101 505 aaKnown RBP8.91□□□□□ -0.98
CSTF1-203ENST00000428552 GDI1P31150 447 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 HOXA6P31267 233 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 CNR2P34972 360 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 SOX9P48436 509 aa8.91□□□□□ -0.98
CSTF1-203ENST00000428552 EVCP57679 992 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms