RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 INTS8Q75QN2 995 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 NT5DC4Q86YG4 428 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 ZNF280BQ86YH2 543 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 BEST2Q8NFU1 509 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 UROC1Q96N76 676 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 ZMAT2Q96NC0 199 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 PPP1R10Q96QC0 940 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 TMEM175Q9BSA9 504 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 MKNK1Q9BUB5 465 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 CXCL16Q9H2A7 254 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 PDE11AQ9HCR9 933 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 R3HCC1Q9Y3T6 440 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 CASTOR2A6NHX0 329 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 MEFVO15553 781 aaPredicted RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 DDHD2O94830 711 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 GNA14O95837 355 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 NFICP08651 508 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 TMEM191BP0C7N4 346 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 TNNI1P19237 187 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 CYP3A5P20815 502 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 PPM1AP35813 382 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 OR1G1P47890 313 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 BCAR1P56945 870 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 CCDC40Q4G0X9 1142 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 KCNT2Q6UVM3 1135 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 FILIP1Q7Z7B0 1213 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 COLGALT1Q8NBJ5 622 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 CLP1Q92989 425 aaKnown RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 ANKRD36BP1Q96IX9 119 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 COLEC11Q9BWP8 271 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 SRRTQ9BXP5 876 aaKnown RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
VARS2-203ENST00000428017 DNAJC25Q9H1X3 360 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 CWH43Q9H720 699 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 HCSTQ9UBK5 93 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
VARS2-203ENST00000428017 TNNC2P02585 160 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 RPL9P32969 192 aaKnown RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 BMPR1AP36894 532 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 DSC1Q08554 894 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 ANO6Q4KMQ2 910 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 C11orf57Q6ZUT1 292 aaPredicted RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 CREBRFQ8IUR6 639 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 FAM114A1Q8IWE2 563 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 ZC3H3Q8IXZ2 948 aaKnown RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 COLGALT2Q8IYK4 626 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 TMC2Q8TDI7 906 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 C18orf25Q96B23 403 aaPredicted RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 CGRRF1Q99675 332 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 C17orf80Q9BSJ5 609 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 C11orf84Q9BUA3 381 aaPredicted RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 METTL14Q9HCE5 456 aaKnown RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 SPG21Q9NZD8 308 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 DNAJB4Q9UDY4 337 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 TUBGCP4Q9UGJ1 667 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 ARMCX3Q9UH62 379 aaPredicted RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
VARS2-203ENST00000428017 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
VARS2-203ENST00000428017 TMEM265A0A087WTH1 108 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 GALTP07902 379 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 SLC11A1P49279 550 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 VAMP7P51809 220 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 AP3M2P53677 418 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 ERVK-21P61565 698 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 BFSP1Q12934 665 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 DUOXA2Q1HG44 320 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 FBXO22Q8NEZ5 403 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
VARS2-203ENST00000428017 PARD3BQ8TEW8 1205 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 ARNTL2Q8WYA1 636 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 TMEM169Q96HH4 297 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 ZNF576Q9H609 170 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 CERS4Q9HA82 394 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 INTS13Q9NVM9 706 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 DPP3Q9NY33 737 aa16.39■□□□□ 0.21
VARS2-203ENST00000428017 MAGEC2Q9UBF1 373 aaPredicted RBP16.39■□□□□ 0.21
VARS2-203ENST00000428017 NT5C1B-RDH14C9J2C7 533 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 SOX1O00570 391 aaPredicted RBP16.38■□□□□ 0.21
VARS2-203ENST00000428017 PODXLO00592 558 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 NRP1O14786 923 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 STX10O60499 249 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 B4GALT3O60512 393 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 ARHGEF15O94989 841 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 RB1P06400 928 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 PBX3P40426 434 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 WNT7BP56706 349 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 MYL5Q02045 173 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 KRT17Q04695 432 aa16.38■□□□□ 0.21
VARS2-203ENST00000428017 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms