RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 POMCP01189 267 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 KRT18P05783 430 aaKnown RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 URODP06132 367 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 GARTP22102 1010 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 KCNA5P22460 613 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 LRPAP1P30533 357 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 HOXA9P31269 272 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 NRIP1P48552 1158 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 GLUD2P49448 558 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 AFF1P51825 1210 aaKnown RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 ZRSR1Q15695 479 aaKnown RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 ZBTB6Q15916 424 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 UPP1Q16831 310 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 EEF1DP3Q658K8 133 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 FUT10Q6P4F1 479 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 FAM173BQ6P4H8 233 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 SHC4Q6S5L8 630 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 ADHFE1Q8IWW8 467 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 ADAMTS19Q8TE59 1207 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 PPM1EQ8WY54 764 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 CCDC34Q96HJ3 373 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 UHRF1Q96T88 793 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-203ENST00000428014 KIFC3Q9BVG8 833 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 MIOSQ9NXC5 875 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 SNTG2Q9NY99 539 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 USTQ9Y2C2 406 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 HES2Q9Y543 173 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 BACE2Q9Y5Z0 518 aa9.98□□□□□ -0.81
SMC1A-203ENST00000428014 MYMKA6NI61 221 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 K7ENM7 598 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 TNFRSF10AO00220 468 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 DLL1O00548 723 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 B4GALT3O60512 393 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 CXCL14O95715 111 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 AKAP5P24588 427 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 NDUFV1P49821 464 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 LIG4P49917 911 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 UVSSAQ2YD98 709 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 L1TD1Q5T7N2 865 aaKnown RBP9.97□□□□□ -0.81
SMC1A-203ENST00000428014 ANKRD54Q6NXT1 300 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 ADGRD2Q7Z7M1 963 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 TMEM173Q86WV6 379 aaPredicted RBP9.97□□□□□ -0.81
SMC1A-203ENST00000428014 ELOA2Q8IYF1 753 aaPredicted RBP9.97□□□□□ -0.81
SMC1A-203ENST00000428014 SPATA18Q8TC71 538 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 SLC22A17Q8WUG5 538 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 TCHPQ9BT92 498 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 GTPBP4Q9BZE4 634 aaKnown RBP9.97□□□□□ -0.81
SMC1A-203ENST00000428014 S1PR5Q9H228 398 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 ADAM7Q9H2U9 754 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 KIAA1586Q9HCI6 787 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 PRDM6Q9NQX0 595 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 CPSF3Q9UKF6 684 aaKnown RBP9.97□□□□□ -0.81
SMC1A-203ENST00000428014 UBQLN1Q9UMX0 589 aaKnown RBP9.97□□□□□ -0.81
SMC1A-203ENST00000428014 PCDHA7Q9UN72 937 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 HPSEQ9Y251 543 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 HCFC2Q9Y5Z7 792 aa9.97□□□□□ -0.81
SMC1A-203ENST00000428014 PDCD11Q14690 1871 aaKnown RBP9.96□□□□□ -0.81
SMC1A-203ENST00000428014 TRIP11Q15643 1979 aa9.96□□□□□ -0.81
SMC1A-203ENST00000428014 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 HIDE1A8MVS5 230 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 CLASP2O75122 1294 aaKnown RBP9.96□□□□□ -0.82
SMC1A-203ENST00000428014 IL18RAPO95256 599 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 FGFR3P22607 806 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 MTHFRP42898 656 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 OR1G1P47890 313 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 ME1P48163 572 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 AARSP49588 968 aaKnown RBP eCLIP9.96□□□□□ -0.824e-11■■□□□ 13.1
SMC1A-203ENST00000428014 CLCN4P51793 760 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 TFF2Q03403 129 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 ENPEPQ07075 957 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 PSMD2Q13200 908 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 BMT2Q1RMZ1 405 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 SLC10A6Q3KNW5 377 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 LILRA6Q6PI73 481 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 ANKS3Q6ZW76 656 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 UNC13DQ70J99 1090 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 C12orf56Q8IXR9 622 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 BCL7CQ8WUZ0 217 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-203ENST00000428014 KLHL5Q96PQ7 755 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 ACCSQ96QU6 501 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 TTPALQ9BTX7 342 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 PHF7Q9BWX1 381 aaPredicted RBP9.96□□□□□ -0.82
SMC1A-203ENST00000428014 SFXN1Q9H9B4 322 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 ZDHHC7Q9NXF8 308 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 TFIP11Q9UBB9 837 aaKnown RBP9.96□□□□□ -0.82
SMC1A-203ENST00000428014 HSFX1Q9UBD0 423 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 KCNH3Q9ULD8 1083 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 ZDHHC9Q9Y397 364 aa9.96□□□□□ -0.82
SMC1A-203ENST00000428014 MTCL1Q9Y4B5 1905 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 A0A087X0B3 334 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms