RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SPATA31D4Q6ZUB0 917 aa22.55■■□□□ 1.2
HSPG2-205ENST00000427897 POMKQ9H5K3 350 aa22.55■■□□□ 1.2
HSPG2-205ENST00000427897 MRPL44Q9H9J2 332 aaKnown RBP22.55■■□□□ 1.2
HSPG2-205ENST00000427897 PIDD1Q9HB75 910 aa22.55■■□□□ 1.2
HSPG2-205ENST00000427897 NUB1Q9Y5A7 615 aa22.55■■□□□ 1.2
HSPG2-205ENST00000427897 CCDC195A0A1B0GUA6 201 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 FAM86C2PA6NEL3 165 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 TULP1O00294 542 aaPredicted RBP22.54■■□□□ 1.2
HSPG2-205ENST00000427897 ABLIM1O14639 778 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 YEATS4O95619 227 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 KCNE1P15382 129 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 GAP43P17677 238 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 RPL17P18621 184 aaKnown RBP22.54■■□□□ 1.2
HSPG2-205ENST00000427897 PSMD5Q16401 504 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 UPP1Q16831 310 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 XKR4Q5GH76 650 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 RTP2Q5QGT7 225 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 FAM212AQ96EL1 285 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 MSTO1Q9BUK6 570 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 LRRC27Q9C0I9 530 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 PLEKHA4Q9H4M7 779 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 RPF1Q9H9Y2 349 aaKnown RBP22.54■■□□□ 1.2
HSPG2-205ENST00000427897 PLEKHA5Q9HAU0 1116 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 CNTN3Q9P232 1028 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 SEL1LQ9UBV2 794 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 CDH22Q9UJ99 828 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 CFAP45Q9UL16 551 aa22.54■■□□□ 1.2
HSPG2-205ENST00000427897 MYH15Q9Y2K3 1946 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 TRIP11Q15643 1979 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 TMEM189-UBE2V1I3L0A0 370 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 PODXLO00592 558 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 OGTO15294 1046 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 GPR37L1O60883 481 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 CUTAO60888 179 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 RPL9P32969 192 aaKnown RBP22.53■■□□□ 1.2
HSPG2-205ENST00000427897 PPP2R3AQ06190 1150 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 SLC10A6Q3KNW5 377 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 ZC2HC1CQ53FD0 456 aaPredicted RBP22.53■■□□□ 1.2
HSPG2-205ENST00000427897 HERC4Q5GLZ8 1057 aaPredicted RBP22.53■■□□□ 1.2
HSPG2-205ENST00000427897 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.53■■□□□ 1.2
HSPG2-205ENST00000427897 GPR149Q86SP6 731 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 SFR1Q86XK3 245 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 HDAC7Q8WUI4 952 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 PIK3R5Q8WYR1 880 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 CITO14578 2027 aa22.53■■□□□ 1.2
HSPG2-205ENST00000427897 MYMKA6NI61 221 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 XPOTO43592 962 aaKnown RBP22.52■■□□□ 1.2
HSPG2-205ENST00000427897 CXCL8P10145 99 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 COL9A1P20849 921 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 ME1P48163 572 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 GTF2BQ00403 316 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 ATL3Q6DD88 541 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 SLFN12LQ6IEE8 588 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 C15orf39Q6ZRI6 1047 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 KCNG4Q8TDN1 519 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 ACSF2Q96CM8 615 aaPredicted RBP22.52■■□□□ 1.2
HSPG2-205ENST00000427897 KIF12Q96FN5 646 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 ZMAT2Q96NC0 199 aaKnown RBP22.52■■□□□ 1.2
HSPG2-205ENST00000427897 LRFN3Q9BTN0 628 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 TBC1D7Q9P0N9 293 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 EXOC7Q9UPT5 735 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 TTC28Q96AY4 2481 aa22.52■■□□□ 1.2
HSPG2-205ENST00000427897 TGM5O43548 720 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 GCNT3O95395 438 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 C1RP00736 705 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 PIGRP01833 764 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 BRCC3P46736 316 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 AMPD3Q01432 767 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 CCDC149Q6ZUS6 474 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 ZNF720Q7Z2F6 126 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 CCDC65Q8IXS2 484 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 SYCP3Q8IZU3 236 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 PLCD3Q8N3E9 789 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 TDRD5Q8NAT2 981 aaKnown RBP22.51■■□□□ 1.19
HSPG2-205ENST00000427897 KREMEN2Q8NCW0 462 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 LNX1Q8TBB1 728 aaPredicted RBP22.51■■□□□ 1.19
HSPG2-205ENST00000427897 C18orf25Q96B23 403 aaPredicted RBP22.51■■□□□ 1.19
HSPG2-205ENST00000427897 PANK4Q9NVE7 773 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 FAM13BQ9NYF5 915 aa22.51■■□□□ 1.19
HSPG2-205ENST00000427897 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.51■■□□□ 1.19
HSPG2-205ENST00000427897 PLXNA3P51805 1871 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 I3L4J1 428 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 MCM4P33991 863 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 SOX4Q06945 474 aaPredicted RBP22.5■■□□□ 1.19
HSPG2-205ENST00000427897 SPAG1Q07617 926 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 LIN9Q5TKA1 542 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 ADALQ6DHV7 355 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 CYP26C1Q6V0L0 522 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 ANKS3Q6ZW76 656 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 MAP4K3Q8IVH8 894 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 IQUBQ8NA54 791 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 KCNN1Q92952 543 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 DHX58Q96C10 678 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 HVCN1Q96D96 273 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 HAPLN2Q9GZV7 340 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 ST6GALNAC4Q9H4F1 302 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 PCDHB13Q9Y5F0 798 aa22.5■■□□□ 1.19
HSPG2-205ENST00000427897 C5orf42Q9H799 3197 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 FGFR3P22607 806 aa22.49■■□□□ 1.19
HSPG2-205ENST00000427897 TNFSF9P41273 254 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms