RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 CASTOR2A6NHX0 329 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 WDR64B1ANS9 1081 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 CHMP2AO43633 222 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 MOSPD3O75425 235 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 RHOBTB1O94844 696 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 KIF4AO95239 1232 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 FOSP01100 380 aaPredicted RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 SRGAP2CP0DJJ0 459 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 IGFBP6P24592 240 aaPredicted RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 GBP1P32455 592 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 MAPK8P45983 427 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 NAPAP54920 295 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 MLLT6P55198 1093 aaPredicted RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 JAKMIP3Q5VZ66 844 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 RAB44Q7Z6P3 723 aaPredicted RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 ZSCAN18Q8TBC5 510 aaPredicted RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 CPB2Q96IY4 423 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 LZTS2Q9BRK4 669 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 NIFKQ9BYG3 293 aaKnown RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 NXF3Q9H4D5 531 aaKnown RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 C8orf33Q9H7E9 229 aaPredicted RBP10.25□□□□□ -0.77
LSG1-202ENST00000427461 SLC8A2Q9UPR5 921 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 CDY1Q9Y6F8 540 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 MAFO75444 373 aaPredicted RBP10.24□□□□□ -0.77
LSG1-202ENST00000427461 DDAH1O94760 285 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 LRG1P02750 347 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 CYP21A2P08686 494 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
LSG1-202ENST00000427461 GNAQP50148 359 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 GSE1Q14687 1217 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 SART3Q15020 963 aaKnown RBP10.24□□□□□ -0.77
LSG1-202ENST00000427461 PIP4P1Q86T03 277 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 RALGPS2Q86X27 583 aaPredicted RBP10.24□□□□□ -0.77
LSG1-202ENST00000427461 YAF2Q8IY57 180 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 FAM200AQ8TCP9 573 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 CRYGNQ8WXF5 182 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 GJA10Q969M2 543 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 MSANTD3Q96H12 275 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 HECTD1Q9ULT8 2610 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 ACACAQ13085 2346 aa10.24□□□□□ -0.77
LSG1-202ENST00000427461 ADAMTS9Q9P2N4 1935 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 APC2O95996 2303 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 CCDC194A0A1B0GVG4 234 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 SMCO2A6NFE2 343 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 H0Y626 953 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 CHADO15335 359 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 TRIM16O95361 564 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 CALM1P0DP23 149 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 CALM2P0DP24 149 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 CALM3P0DP25 149 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 ADCY7P51828 1080 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 HNRNPUQ00839 825 aaKnown RBP eCLIP10.23□□□□□ -0.77
LSG1-202ENST00000427461 GRIK3Q13003 919 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 PRR16Q569H4 304 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 PLA2G4FQ68DD2 849 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 C1orf228Q6PIY5 440 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 PDZD4Q76G19 769 aaPredicted RBP10.23□□□□□ -0.77
LSG1-202ENST00000427461 SRGAP1Q7Z6B7 1085 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 RALYLQ86SE5 291 aaKnown RBP10.23□□□□□ -0.77
LSG1-202ENST00000427461 CDR2LQ86X02 465 aaPredicted RBP10.23□□□□□ -0.77
LSG1-202ENST00000427461 PLEKHM2Q8IWE5 1019 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 SYNPOQ8N3V7 929 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 LRRC3BQ96PB8 259 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 UBL7Q96S82 380 aaPredicted RBP10.23□□□□□ -0.77
LSG1-202ENST00000427461 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 DIAPH3Q9NSV4 1193 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 GIT1Q9Y2X7 761 aa10.23□□□□□ -0.77
LSG1-202ENST00000427461 URB1O60287 2271 aaKnown RBP10.22□□□□□ -0.77
LSG1-202ENST00000427461 ARHGEF37A1IGU5 675 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 E7EWF7 191 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 ZNF197O14709 1029 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 TSPAN1O60635 241 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 CYP3A4P08684 503 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 MYL4P12829 197 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 TNK2Q07912 1038 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 SEMA3BQ13214 749 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 AP3B2Q13367 1082 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 TEAD2Q15562 447 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 CAMKK1Q8N5S9 505 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 PNPLA1Q8N8W4 532 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 ZNF579Q8NAF0 562 aaKnown RBP10.22□□□□□ -0.77
LSG1-202ENST00000427461 NCOA7Q8NI08 942 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 PRPF31Q8WWY3 499 aaKnown RBP10.22□□□□□ -0.77
LSG1-202ENST00000427461 PIGKQ92643 395 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 UNC45AQ9H3U1 944 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 TRPV4Q9HBA0 871 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 FSCN3Q9NQT6 498 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
LSG1-202ENST00000427461 MTRRQ9UBK8 725 aa10.22□□□□□ -0.77
LSG1-202ENST00000427461 MYO18BQ8IUG5 2567 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms