RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TMEM132DQ14C87 1099 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 ZBTB6Q15916 424 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 DUOXA2Q1HG44 320 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 C9orf50Q5SZB4 431 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 ZNF689Q96CS4 500 aaPredicted RBP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 CASD1Q96PB1 797 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 ZBED2Q9BTP6 218 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 RNF19AQ9NV58 838 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 INSL6Q9Y581 213 aa16.7■□□□□ 0.26
COL11A1-204ENST00000427239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL11A1-204ENST00000427239 PTGESO14684 152 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 GTF2H1P32780 548 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 GRIK3Q13003 919 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 TCERG1LQ5VWI1 586 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 JADE1Q6IE81 842 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 SLC35C1Q96A29 364 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 ZMAT2Q96NC0 199 aaKnown RBP16.69■□□□□ 0.26
COL11A1-204ENST00000427239 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
COL11A1-204ENST00000427239 POP1Q99575 1024 aaKnown RBP16.69■□□□□ 0.26
COL11A1-204ENST00000427239 RAD9AQ99638 391 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 CGRRF1Q99675 332 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 TUBGCP2Q9BSJ2 902 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 UBQLN1Q9UMX0 589 aaKnown RBP16.69■□□□□ 0.26
COL11A1-204ENST00000427239 INPP5FQ9Y2H2 1132 aa16.69■□□□□ 0.26
COL11A1-204ENST00000427239 LRRIQ3A6PVS8 624 aaPredicted RBP16.68■□□□□ 0.26
COL11A1-204ENST00000427239 POMCP01189 267 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 TPM2P07951 284 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 CYP3A5P20815 502 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 SCNN1GP51170 649 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
COL11A1-204ENST00000427239 WNT7BP56706 349 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 DLG4P78352 724 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 HTRA4P83105 476 aaPredicted RBP16.68■□□□□ 0.26
COL11A1-204ENST00000427239 PLEKHO2Q8TD55 490 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 ANKRD36BP1Q96IX9 119 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 YME1L1Q96TA2 773 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 MIOSQ9NXC5 875 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 LIMA1Q9UHB6 759 aaKnown RBP16.68■□□□□ 0.26
COL11A1-204ENST00000427239 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
COL11A1-204ENST00000427239 TBKBP1A7MCY6 615 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 TFAMQ00059 246 aaKnown RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 RNASELQ05823 741 aaKnown RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 DCAF17Q5H9S7 520 aaPredicted RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 FAM117BQ6P1L5 589 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 RBSNQ9H1K0 784 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 CXCL16Q9H2A7 254 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 RC3H2Q9HBD1 1191 aaKnown RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 TBC1D13Q9NVG8 400 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 TNNC2P02585 160 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 NFICP08651 508 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 TMEM191BP0C7N4 346 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 KCNH2Q12809 1159 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 NAB2Q15742 525 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 GLRA4Q5JXX5 417 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 C1orf220Q5T0J3 134 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 TMCO2Q7Z6W1 182 aaPredicted RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 EFCAB13Q8IY85 973 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 CMTR2Q8IYT2 770 aaKnown RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 LRRC43Q8N309 656 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 ZNF516Q92618 1163 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 FAM193BQ96PV7 902 aaPredicted RBP16.67■□□□□ 0.26
COL11A1-204ENST00000427239 PLAGL2Q9UPG8 496 aa16.67■□□□□ 0.26
COL11A1-204ENST00000427239 CARNS1A5YM72 827 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 PMM2O15305 246 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
COL11A1-204ENST00000427239 TRIM49P0CI25 452 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 TRIM49CP0CI26 452 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 RPL9P32969 192 aaKnown RBP16.66■□□□□ 0.26
COL11A1-204ENST00000427239 CETN1Q12798 172 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 TUSC3Q13454 348 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 BTG3Q14201 252 aaPredicted RBP16.66■□□□□ 0.26
COL11A1-204ENST00000427239 KRT31Q15323 416 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 KRT39Q6A163 491 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 TDHQ8IZJ6 230 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 NDST4Q9H3R1 872 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 TMEM8AQ9HCN3 771 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 DPP3Q9NY33 737 aa16.66■□□□□ 0.26
COL11A1-204ENST00000427239 TLL1O43897 1013 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 N4BP1O75113 896 aaKnown RBP16.65■□□□□ 0.26
COL11A1-204ENST00000427239 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
COL11A1-204ENST00000427239 GATMP50440 423 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 VWA3BQ502W6 1294 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 SV2AQ7L0J3 742 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 OR5B17Q8NGF7 314 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 C18orf25Q96B23 403 aaPredicted RBP16.65■□□□□ 0.26
COL11A1-204ENST00000427239 DDX27Q96GQ7 796 aaKnown RBP16.65■□□□□ 0.26
COL11A1-204ENST00000427239 UROC1Q96N76 676 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 MTMR12Q9C0I1 747 aa16.65■□□□□ 0.26
COL11A1-204ENST00000427239 ITGA11Q9UKX5 1188 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms