RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 USP33Q8TEY7 942 aa13.21□□□□□ -0.3
HDLBP-214ENST00000427183 TSSK1BQ9BXA7 367 aa13.21□□□□□ -0.3
HDLBP-214ENST00000427183 CAPN10Q9HC96 672 aa13.21□□□□□ -0.3
HDLBP-214ENST00000427183 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.3
HDLBP-214ENST00000427183 KCNN4O15554 427 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 TOMM70O94826 608 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 SGO1Q5FBB7 561 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 UNC13DQ70J99 1090 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 BNIPLQ7Z465 357 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 VPS50Q96JG6 964 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 PSMC5P62195 406 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ALCAMQ13740 583 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 TLK2Q86UE8 772 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 XXYLT1Q8NBI6 393 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ELMO2Q96JJ3 720 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 NSMCE4AQ9NXX6 385 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CAND2O75155 1236 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ACTR2P61160 394 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 PDAP1Q13442 181 aaKnown RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 MTM1Q13496 603 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 TRIM25Q14258 630 aaKnown RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ZNF235Q14590 738 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 RESP18Q5W5W9 173 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ITPRIPL1Q6GPH6 555 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 XDHP47989 1333 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CDH2P19022 906 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CPA2P48052 419 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 MAPK6Q16659 721 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 TMC4Q7Z404 712 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CDKL3Q8IVW4 592 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 INTS2Q9H0H0 1204 aaKnown RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 USP21Q9UK80 565 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 RNF103O00237 685 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 VAMP7P51809 220 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 ABCE1P61221 599 aaKnown RBP13.2□□□□□ -0.3
HDLBP-214ENST00000427183 SH3BP5LQ7L8J4 393 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 GRAMD1AQ96CP6 724 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 CAAP1Q9H8G2 361 aa13.2□□□□□ -0.3
HDLBP-214ENST00000427183 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SRP72O76094 671 aaKnown RBP13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SOAT1P35610 550 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SRLQ86TD4 932 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SRPK1Q96SB4 655 aaKnown RBP13.19□□□□□ -0.3
HDLBP-214ENST00000427183 CXorf56Q9H5V9 222 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 RAD18Q9NS91 495 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 DLGAP2Q9P1A6 1054 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 PNMA8BQ9ULN7 279 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-214ENST00000427183 FARP1Q9Y4F1 1045 aaPredicted RBP13.19□□□□□ -0.3
HDLBP-214ENST00000427183 CPS1P31327 1500 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SUPT3HB4E1H0 165 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 NLRP9Q7RTR0 991 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 DCUN1D1Q96GG9 259 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 LRRC1Q9BTT6 524 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 PCMTD2Q9NV79 361 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 IFNAR1P17181 557 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 GLYCTKQ8IVS8 523 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 ABCB11O95342 1321 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 RIMBP3CA6NJZ7 1639 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 RIMBP3BA6NNM3 1639 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 RIMBP3Q9UFD9 1639 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 UBXN8O00124 270 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 APOL1O14791 398 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 TEX33O43247 280 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 COASYQ13057 564 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 MTMR1Q13613 665 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 TRIM71Q2Q1W2 868 aaKnown RBP13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SLC44A4Q53GD3 710 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 RHOT1Q8IXI2 618 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 DTNBP1Q96EV8 351 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 SYTL3Q4VX76 610 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 CCDC134Q9H6E4 229 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 ARHGEF3Q9NR81 526 aa13.19□□□□□ -0.3
HDLBP-214ENST00000427183 STX3Q13277 289 aa13.18□□□□□ -0.3
HDLBP-214ENST00000427183 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-214ENST00000427183 BEST2Q8NFU1 509 aa13.18□□□□□ -0.3
HDLBP-214ENST00000427183 GOLPH3LQ9H4A5 285 aa13.18□□□□□ -0.3
HDLBP-214ENST00000427183 PIDD1Q9HB75 910 aa13.18□□□□□ -0.3
HDLBP-214ENST00000427183 GID8Q9NWU2 228 aa13.18□□□□□ -0.3
HDLBP-214ENST00000427183 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
HDLBP-214ENST00000427183 DTNAQ9Y4J8 743 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms