RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 SPATA31D4Q6ZUB0 917 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 SV2BQ7L1I2 683 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 ZNF720Q7Z2F6 126 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 PALB2Q86YC2 1186 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 TMEM130Q8N3G9 435 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 UROC1Q96N76 676 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 LRFN3Q9BTN0 628 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 IKZF4Q9H2S9 585 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 ST6GALNAC4Q9H4F1 302 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 ANKRD63C9JTQ0 380 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 TGM5O43548 720 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 TBCAO75347 108 aaKnown RBP20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 YEATS4O95619 227 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 HSP90AA1P07900 732 aaKnown RBP20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 PDIA4P13667 645 aaKnown RBP20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 SCP2P22307 547 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 FGFR3P22607 806 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 TNFSF9P41273 254 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 HERC4Q5GLZ8 1057 aaPredicted RBP20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 AXDND1Q5T1B0 1012 aaPredicted RBP20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 SHC4Q6S5L8 630 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 GPR149Q86SP6 731 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 SFR1Q86XK3 245 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 CEP57Q86XR8 500 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 MAP4K3Q8IVH8 894 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 PIK3R5Q8WYR1 880 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 MAN1C1Q9NR34 630 aa20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMARCAL1-205ENST00000425815 A0A0B4J269 797 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 TTC26A0AVF1 554 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 TISP43B9A030 160 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 ADAM12O43184 909 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 PPP1R37O75864 691 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 PAPLNO95428 1278 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 GLUD1P00367 558 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 C1RP00736 705 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 ADRB2P07550 413 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 CXCL8P10145 99 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 TXLNAP40222 546 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 MTHFRP42898 656 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 BRCC3P46736 316 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 LIG4P49917 911 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 ZBTB6Q15916 424 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 E2F4Q16254 413 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 ATAT1Q5SQI0 421 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 GLYCTKQ8IVS8 523 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 PDILTQ8N807 584 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 BICD1Q96G01 975 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 DDX27Q96GQ7 796 aaKnown RBP20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 NECTIN4Q96NY8 510 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 SFXN1Q9H9B4 322 aa20.02■□□□□ 0.8
SMARCAL1-205ENST00000425815 TDRD15B5MCY1 1934 aaKnown RBP20.02■□□□□ 0.79
SMARCAL1-205ENST00000425815 FRMD3A2A2Y4 597 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 I3L4J1 428 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 PODXLO00592 558 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 CLTAP09496 248 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 SP100P23497 879 aaPredicted RBP20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 STAT6P42226 847 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 SPAG1Q07617 926 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 ELAVL2Q12926 359 aaKnown RBP20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 TMEM31Q5JXX7 168 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 RSPO2Q6UXX9 243 aaPredicted RBP20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 CMASQ8NFW8 434 aaPredicted RBP20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 RIPOR3Q96MK2 946 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 PLEKHA5Q9HAU0 1116 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 SLC38A7Q9NVC3 462 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 ZDHHC9Q9Y397 364 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 STYXL1Q9Y6J8 313 aa20.01■□□□□ 0.79
SMARCAL1-205ENST00000425815 CCDC195A0A1B0GUA6 201 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 LACTBL1A8MY62 500 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 C2CD4DB7Z1M9 353 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 HNRNPDLO14979 420 aaKnown RBP20■□□□□ 0.79
SMARCAL1-205ENST00000425815 OGTO15294 1046 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 CUTAO60888 179 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 RFPL2O75678 378 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 MATR3P43243 847 aaKnown RBP eCLIP20■□□□□ 0.79
SMARCAL1-205ENST00000425815 KCNA1Q09470 495 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 ENOX2Q16206 610 aaKnown RBP20■□□□□ 0.79
SMARCAL1-205ENST00000425815 PDZRN4Q6ZMN7 1036 aaPredicted RBP20■□□□□ 0.79
SMARCAL1-205ENST00000425815 HDAC7Q8WUI4 952 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 STAMQ92783 540 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 ZNF707Q96C28 371 aaPredicted RBP20■□□□□ 0.79
SMARCAL1-205ENST00000425815 FGFBP2Q9BYJ0 223 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 TBC1D7Q9P0N9 293 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 TUBGCP4Q9UGJ1 667 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 RAPGEFL1Q9UHV5 662 aa20■□□□□ 0.79
SMARCAL1-205ENST00000425815 TKTP29401 623 aaKnown RBP19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 ADSSP30520 456 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 RPL9P32969 192 aaKnown RBP19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 DNM1Q05193 864 aaKnown RBP19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 PSMD5Q16401 504 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 C15orf39Q6ZRI6 1047 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 PLEKHA4Q9H4M7 779 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 KBTBD4Q9NVX7 518 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 SEL1LQ9UBV2 794 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 CPSF3Q9UKF6 684 aaKnown RBP19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 PCDHA7Q9UN72 937 aa19.99■□□□□ 0.79
SMARCAL1-205ENST00000425815 COL9A1P20849 921 aa19.98■□□□□ 0.79
SMARCAL1-205ENST00000425815 CASP5P51878 434 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms