RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CITO14578 2027 aa23.57■■□□□ 1.36
CDCP1-202ENST00000425231 STX6O43752 255 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 RFPL2O75678 378 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 HARSP12081 509 aaKnown RBP23.56■■□□□ 1.36
CDCP1-202ENST00000425231 CEBPZQ03701 1054 aaKnown RBP23.56■■□□□ 1.36
CDCP1-202ENST00000425231 NOLC1Q14978 699 aaKnown RBP eCLIP23.56■■□□□ 1.36
CDCP1-202ENST00000425231 SEZ6Q53EL9 994 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 ZDHHC14Q8IZN3 488 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 MYCT1Q8N699 235 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 CLIC6Q96NY7 704 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 USP28Q96RU2 1077 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 PARVGQ9HBI0 331 aa23.56■■□□□ 1.36
CDCP1-202ENST00000425231 CLDN3O15551 220 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 FAM13AO94988 1023 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 FGFR3P22607 806 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 PSMD5Q16401 504 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 SLC10A6Q3KNW5 377 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 ELMSAN1Q6PJG2 1045 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 CYP26C1Q6V0L0 522 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.55■■□□□ 1.36
CDCP1-202ENST00000425231 BMP8AQ7Z5Y6 402 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 TDRD5Q8NAT2 981 aaKnown RBP23.55■■□□□ 1.36
CDCP1-202ENST00000425231 FIZ1Q96SL8 496 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 ZSCAN16Q9H4T2 348 aaPredicted RBP23.55■■□□□ 1.36
CDCP1-202ENST00000425231 SLC38A7Q9NVC3 462 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 TBX20Q9UMR3 447 aa23.55■■□□□ 1.36
CDCP1-202ENST00000425231 MORC2Q9Y6X9 1032 aaPredicted RBP23.55■■□□□ 1.36
CDCP1-202ENST00000425231 TMEM221A6NGB7 291 aa23.54■■□□□ 1.36
CDCP1-202ENST00000425231 M0R296 226 aa23.54■■□□□ 1.36
CDCP1-202ENST00000425231 TRAK2O60296 914 aa23.54■■□□□ 1.36
CDCP1-202ENST00000425231 CCDC149Q6ZUS6 474 aa23.54■■□□□ 1.36
CDCP1-202ENST00000425231 PLCD3Q8N3E9 789 aa23.54■■□□□ 1.36
CDCP1-202ENST00000425231 KREMEN2Q8NCW0 462 aa23.54■■□□□ 1.36
CDCP1-202ENST00000425231 ZNF707Q96C28 371 aaPredicted RBP23.54■■□□□ 1.36
CDCP1-202ENST00000425231 DDX27Q96GQ7 796 aaKnown RBP23.54■■□□□ 1.36
CDCP1-202ENST00000425231 ADAM12O43184 909 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 KRT18P05783 430 aaKnown RBP23.53■■□□□ 1.36
CDCP1-202ENST00000425231 SCP2P22307 547 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 SIGLEC14Q08ET2 396 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 SLC39A14Q15043 492 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 PDXDC1Q6P996 788 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 C18orf25Q96B23 403 aaPredicted RBP23.53■■□□□ 1.36
CDCP1-202ENST00000425231 ASIC4Q96FT7 647 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 ZDHHC7Q9NXF8 308 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 LIMD1Q9UGP4 676 aa23.53■■□□□ 1.36
CDCP1-202ENST00000425231 K7ENM7 598 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 PIGRP01833 764 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 BRCC3P46736 316 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 BICD1Q96G01 975 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 WDR6Q9NNW5 1121 aaKnown RBP23.52■■□□□ 1.36
CDCP1-202ENST00000425231 STK17AQ9UEE5 414 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 CCDC39Q9UFE4 941 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 SORCS3Q9UPU3 1222 aa23.52■■□□□ 1.36
CDCP1-202ENST00000425231 PDCD11Q14690 1871 aaKnown RBP23.52■■□□□ 1.35
CDCP1-202ENST00000425231 I3L4J1 428 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 PODXLO00592 558 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 TRAPPC3O43617 180 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 GTF2BQ00403 316 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 OTOP3Q7RTS5 596 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 SMG7Q92540 1137 aaKnown RBP23.51■■□□□ 1.35
CDCP1-202ENST00000425231 ACSF2Q96CM8 615 aaPredicted RBP23.51■■□□□ 1.35
CDCP1-202ENST00000425231 ZHX3Q9H4I2 956 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 MTRRQ9UBK8 725 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 FBXW11Q9UKB1 542 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 WDFY4Q6ZS81 3184 aa23.51■■□□□ 1.35
CDCP1-202ENST00000425231 FAM189A1O60320 539 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 N4BP1O75113 896 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 TBCAO75347 108 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 ZMYND10O75800 440 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 ASGR2P07307 311 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 CLTAP09496 248 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 CXCL8P10145 99 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 TKTP29401 623 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 NMT1P30419 496 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 RPL9P32969 192 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 TNFSF9P41273 254 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 MATR3P43243 847 aaKnown RBP eCLIP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 NASPP49321 788 aaPredicted RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 LIG4P49917 911 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 RSPO2Q6UXX9 243 aaPredicted RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 PBXIP1Q96AQ6 731 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 MFSD14AQ96MC6 490 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 PRKD2Q9BZL6 878 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 PLEKHA5Q9HAU0 1116 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 TTC26A0AVF1 554 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 HNRNPDLO14979 420 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 OR1D2P34982 312 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 RAB33AQ14088 237 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 RRAGBQ5VZM2 374 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 SLC39A4Q6P5W5 647 aa23.5■■□□□ 1.35
CDCP1-202ENST00000425231 KRI1Q8N9T8 703 aaKnown RBP23.5■■□□□ 1.35
CDCP1-202ENST00000425231 ZNF318Q5VUA4 2279 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 MTMR3Q13615 1198 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 ZBTB6Q15916 424 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 ZC2HC1CQ53FD0 456 aaPredicted RBP23.49■■□□□ 1.35
CDCP1-202ENST00000425231 ZBTB41Q5SVQ8 909 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 DYMQ7RTS9 669 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 MAP4K3Q8IVH8 894 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 UBALD2Q8IYN6 164 aa23.49■■□□□ 1.35
CDCP1-202ENST00000425231 LINC00301Q8NCQ3 95 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms