RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 TTC26A0AVF1 554 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 OGTO15294 1046 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 TEX28O15482 410 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 TNFSF9P41273 254 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 HERC4Q5GLZ8 1057 aaPredicted RBP19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 RTP2Q5QGT7 225 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 ZBTB41Q5SVQ8 909 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 CNNM4Q6P4Q7 775 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 C3orf58Q8NDZ4 430 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 DHX58Q96C10 678 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 FGFBP2Q9BYJ0 223 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 TRIM9Q9C026 710 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 MRPL44Q9H9J2 332 aaKnown RBP19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 PLEKHA5Q9HAU0 1116 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 SLC38A7Q9NVC3 462 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 PANK4Q9NVE7 773 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 TBC1D7Q9P0N9 293 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 FNIP2Q9P278 1114 aa19.54■□□□□ 0.72
IGHV3-47-201ENST00000425060 TISP43B9A030 160 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 POLR2DO15514 142 aaKnown RBP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 CXCL8P10145 99 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 IDEP14735 1019 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 KLRC2P26717 231 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 MATR3P43243 847 aaKnown RBP eCLIP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 CASP5P51878 434 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 KCNA1Q09470 495 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 ELAVL2Q12926 359 aaKnown RBP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 BECN1Q14457 450 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 ZBTB6Q15916 424 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 KYAT1Q16773 422 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 KIAA1841Q6NSI8 718 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 LEO1Q8WVC0 666 aaPredicted RBP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 C18orf25Q96B23 403 aaPredicted RBP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 DDX27Q96GQ7 796 aaKnown RBP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 LRRC27Q9C0I9 530 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 IKZF4Q9H2S9 585 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 ADAM7Q9H2U9 754 aa19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 CPSF3Q9UKF6 684 aaKnown RBP19.53■□□□□ 0.72
IGHV3-47-201ENST00000425060 C5orf42Q9H799 3197 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 B3GAT3O94766 335 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 C1RP00736 705 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 ADSSP30520 456 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 KRT85P78386 507 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 ENOX2Q16206 610 aaKnown RBP19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 TPRNQ4KMQ1 711 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 L1TD1Q5T7N2 865 aaKnown RBP19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 FAM171A1Q5VUB5 890 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 C12orf76Q8N812 135 aaPredicted RBP19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 LNX1Q8TBB1 728 aaPredicted RBP19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 RIN2Q8WYP3 895 aaPredicted RBP19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 PIK3R5Q8WYR1 880 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 KHSRPQ92945 711 aaKnown RBP eCLIP19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 C7orf25Q9BPX7 421 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 TTPALQ9BTX7 342 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 MSTO1Q9BUK6 570 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 APOL5Q9BWW9 433 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 DZANK1Q9NVP4 752 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 FAM13BQ9NYF5 915 aa19.52■□□□□ 0.72
IGHV3-47-201ENST00000425060 PDCD11Q14690 1871 aaKnown RBP19.52■□□□□ 0.71
IGHV3-47-201ENST00000425060 LACTBL1A8MY62 500 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 PODXLO00592 558 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 ADH1AP07327 375 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 MYBP10242 640 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 FGFR3P22607 806 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 RPL9P32969 192 aaKnown RBP19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 AMPD3Q01432 767 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 ITIH3Q06033 890 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 ADALQ6DHV7 355 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 SLFN12LQ6IEE8 588 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 KANK3Q6NY19 840 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 LILRA6Q6PI73 481 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 PRSS55Q6UWB4 352 aaPredicted RBP19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 CCDC65Q8IXS2 484 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 FEZF2Q8TBJ5 459 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 FBXL18Q96ME1 805 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 MAGEF1Q9HAY2 307 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 CDH22Q9UJ99 828 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 PCDHB13Q9Y5F0 798 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 VWA8A3KMH1 1905 aa19.51■□□□□ 0.71
IGHV3-47-201ENST00000425060 GCNT3O95395 438 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 CMA1P23946 247 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 BRCC3P46736 316 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 ALCAMQ13740 583 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 CBX2Q14781 532 aaPredicted RBP19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 TMEM130Q8N3G9 435 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 ACCSQ96QU6 501 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 CLSTN3Q9BQT9 956 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 PHF7Q9BWX1 381 aaPredicted RBP19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 RPF1Q9H9Y2 349 aaKnown RBP19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 KCNH3Q9ULD8 1083 aa19.5■□□□□ 0.71
IGHV3-47-201ENST00000425060 LOC730098B7Z3J9 87 aa19.49■□□□□ 0.71
IGHV3-47-201ENST00000425060 PAPLNO95428 1278 aa19.49■□□□□ 0.71
IGHV3-47-201ENST00000425060 RPL17P18621 184 aaKnown RBP19.49■□□□□ 0.71
IGHV3-47-201ENST00000425060 CYP3A5P20815 502 aa19.49■□□□□ 0.71
IGHV3-47-201ENST00000425060 LRPAP1P30533 357 aa19.49■□□□□ 0.71
IGHV3-47-201ENST00000425060 SSTR3P32745 418 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms