RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 GUCY2CP25092 1073 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 YARSP54577 528 aaKnown RBP19.46■□□□□ 0.71
GPC1-203ENST00000425056 HTR4Q13639 388 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 RAB33AQ14088 237 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 PPM1LQ5SGD2 360 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 ALKAL1Q6UXT8 129 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 SLC44A3Q8N4M1 653 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 C3orf58Q8NDZ4 430 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 TARS2Q9BW92 718 aaKnown RBP19.46■□□□□ 0.71
GPC1-203ENST00000425056 GOLGA2P5Q9HBQ8 144 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 ZFP37Q9Y6Q3 630 aaPredicted RBP19.46■□□□□ 0.71
GPC1-203ENST00000425056 MYH15Q9Y2K3 1946 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 PROB1E7EW31 1015 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 CFHP08603 1231 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 MCF2P10911 925 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 FSHRP23945 695 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 SOX4Q06945 474 aaPredicted RBP19.45■□□□□ 0.7
GPC1-203ENST00000425056 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 GRASPQ7Z6J2 395 aaPredicted RBP19.45■□□□□ 0.7
GPC1-203ENST00000425056 KCTD17Q8N5Z5 321 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 DDX27Q96GQ7 796 aaKnown RBP19.45■□□□□ 0.7
GPC1-203ENST00000425056 TMX3Q96JJ7 454 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 SNX27Q96L92 541 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 RTP3Q9BQQ7 232 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 NTPCRQ9BSD7 190 aaKnown RBP19.45■□□□□ 0.7
GPC1-203ENST00000425056 SLC38A7Q9NVC3 462 aa19.45■□□□□ 0.7
GPC1-203ENST00000425056 CFAP54Q96N23 3096 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 KRBA1A5PL33 1030 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 TRAPPC3O43617 180 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 PI15O43692 258 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 GFRA3O60609 400 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 XYLBO75191 536 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 TKTP29401 623 aaKnown RBP19.44■□□□□ 0.7
GPC1-203ENST00000425056 OR1D2P34982 312 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 MPZL3Q6UWV2 235 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 ANKS3Q6ZW76 656 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 CCDC105Q8IYK2 499 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 SLC7A14Q8TBB6 771 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 SPIRE2Q8WWL2 714 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 CNTN3Q9P232 1028 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 BACE2Q9Y5Z0 518 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 NOTCH4Q99466 2003 aa19.44■□□□□ 0.7
GPC1-203ENST00000425056 SLC16A4O15374 487 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 CCL16O15467 120 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 CD2BP2O95400 341 aaKnown RBP19.43■□□□□ 0.7
GPC1-203ENST00000425056 KCNE1P15382 129 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 NBL1P41271 181 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 BRCC3P46736 316 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 OSTNP61366 133 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 NTHL1P78549 312 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 UVSSAQ2YD98 709 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 AXDND1Q5T1B0 1012 aaPredicted RBP19.43■□□□□ 0.7
GPC1-203ENST00000425056 ARL6IP4Q66PJ3 421 aaKnown RBP19.43■□□□□ 0.7
GPC1-203ENST00000425056 RSPO2Q6UXX9 243 aaPredicted RBP19.43■□□□□ 0.7
GPC1-203ENST00000425056 RTL10Q7L3V2 364 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 SYT2Q8N9I0 419 aaPredicted RBP19.43■□□□□ 0.7
GPC1-203ENST00000425056 ZMAT2Q96NC0 199 aaKnown RBP19.43■□□□□ 0.7
GPC1-203ENST00000425056 PNMA5Q96PV4 448 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 KCND2Q9NZV8 630 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 CDH7Q9ULB5 785 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 CDY1Q9Y6F8 540 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 NUMBLQ9Y6R0 609 aa19.43■□□□□ 0.7
GPC1-203ENST00000425056 ZFHX2Q9C0A1 2572 aaPredicted RBP19.42■□□□□ 0.7
GPC1-203ENST00000425056 SFI1A8K8P3 1242 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 I3L4J1 428 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 PODXLO00592 558 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 PLS3P13797 630 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 GJB2P29033 226 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 SLC12A3P55017 1021 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 ZRSR1Q15695 479 aaKnown RBP19.42■□□□□ 0.7
GPC1-203ENST00000425056 TMEM161BQ8NDZ6 487 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 GPR152Q8TDT2 470 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 ACAP3Q96P50 834 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 TCHPQ9BT92 498 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 SLC2A4RGQ9NR83 387 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 KCNG1Q9UIX4 513 aa19.42■□□□□ 0.7
GPC1-203ENST00000425056 VWA3AA6NCI4 1184 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 MEFVO15553 781 aaPredicted RBP19.41■□□□□ 0.7
GPC1-203ENST00000425056 TOM1L1O75674 476 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 RAD51AP2Q09MP3 1159 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 STRN3Q13033 797 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 NOLC1Q14978 699 aaKnown RBP eCLIP19.41■□□□□ 0.7
GPC1-203ENST00000425056 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 SLC8B1Q6J4K2 584 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 FGF13Q92913 245 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 FGF14Q92915 247 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 CA14Q9ULX7 337 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 POLIQ9UNA4 740 aa19.41■□□□□ 0.7
GPC1-203ENST00000425056 H3BQV1 296 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 SYN3O14994 580 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 MAPTP10636 758 aaKnown RBP19.4■□□□□ 0.7
GPC1-203ENST00000425056 RPL9P32969 192 aaKnown RBP19.4■□□□□ 0.7
GPC1-203ENST00000425056 SMTNP53814 917 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 ZPBP2Q6X784 338 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 MTSS1LQ765P7 747 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 DTWD2Q8NBA8 298 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 KCNN1Q92952 543 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 CDK5RAP3Q96JB5 506 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 ZBTB45Q96K62 511 aaPredicted RBP19.4■□□□□ 0.7
GPC1-203ENST00000425056 TBC1D17Q9HA65 648 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms