RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 GLT1D1Q96MS3 346 aa16.21■□□□□ 0.18
CALD1-206ENST00000424922 TSEN34Q9BSV6 310 aaKnown RBP16.21■□□□□ 0.18
CALD1-206ENST00000424922 TMEM117Q9H0C3 514 aa16.21■□□□□ 0.18
CALD1-206ENST00000424922 NLRC4Q9NPP4 1024 aa16.21■□□□□ 0.18
CALD1-206ENST00000424922 CEP72Q9P209 647 aa16.21■□□□□ 0.18
CALD1-206ENST00000424922 ARHGAP20Q9P2F6 1191 aa16.21■□□□□ 0.18
CALD1-206ENST00000424922 SSU72P8A0A1W2PR75 194 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 CTAGE15A4D2H0 777 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 CTAGE8P0CG41 777 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 MXI1P50539 228 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 CRYBB1P53674 252 aaPredicted RBP16.2■□□□□ 0.18
CALD1-206ENST00000424922 CETN1Q12798 172 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 KIF5AQ12840 1032 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
CALD1-206ENST00000424922 SNX17Q15036 470 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 MTFR1Q15390 333 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 LMBRD2Q68DH5 695 aaPredicted RBP16.2■□□□□ 0.18
CALD1-206ENST00000424922 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
CALD1-206ENST00000424922 CTAGE6Q86UF2 777 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 CTAGE4Q8IX94 777 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 CEP120Q8N960 986 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 FNBP1Q96RU3 617 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 GANQ9H2C0 597 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 PLCB1Q9NQ66 1216 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 RAB21Q9UL25 225 aa16.2■□□□□ 0.18
CALD1-206ENST00000424922 A0A1B0GUA9 196 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 TNNI1P19237 187 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 MRPS6P82932 125 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 KLHDC7AQ5VTJ3 777 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 RRAGAQ7L523 313 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 RSPH3Q86UC2 560 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 TXLNBQ8N3L3 684 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 HNRNPLLQ8WVV9 542 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 FAM84AQ96KN4 292 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 CELF4Q9BZC1 486 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 SIX2Q9NPC8 291 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 PUF60Q9UHX1 559 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 CPSF3Q9UKF6 684 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 P4HA2O15460 535 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 ENPEPQ07075 957 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 KRT39Q6A163 491 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 BRSK2Q8IWQ3 736 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 ZNF516Q92618 1163 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 LACRTQ9GZZ8 138 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 INTS2Q9H0H0 1204 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 TMEM8AQ9HCN3 771 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 ARFGAP3Q9NP61 516 aa16.19■□□□□ 0.18
CALD1-206ENST00000424922 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
CALD1-206ENST00000424922 PTPRJQ12913 1337 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 RCCD1A6NED2 376 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 LRRC53A6NM62 1247 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 M0QZ92 97 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 CLGNO14967 610 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 ZNF263O14978 683 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 LRRN2O75325 713 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 MCF2P10911 925 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 UCHL3P15374 230 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 HOXA11P31270 313 aaPredicted RBP16.18■□□□□ 0.18
CALD1-206ENST00000424922 GTF2H1P32780 548 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 KIF11P52732 1056 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 CLDN10P78369 228 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 SV2AQ7L0J3 742 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 TMEM192Q8IY95 271 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 LMO3Q8TAP4 145 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 RPGRIP1Q96KN7 1286 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 RNF208Q9H0X6 261 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 PAK6Q9NQU5 681 aaPredicted RBP16.18■□□□□ 0.18
CALD1-206ENST00000424922 CDY2AQ9Y6F7 541 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 VGLL3A8MV65 326 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 PJA2O43164 708 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 CTSHP09668 335 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 CCL5P13501 91 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 EIF4A3P38919 411 aaKnown RBP16.18■□□□□ 0.18
CALD1-206ENST00000424922 PCBP1Q15365 356 aaKnown RBP eCLIP16.18■□□□□ 0.18
CALD1-206ENST00000424922 ASTE1Q2TB18 679 aaPredicted RBP16.18■□□□□ 0.18
CALD1-206ENST00000424922 GJB7Q6PEY0 223 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 ADPGKQ9BRR6 497 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 EPC1Q9H2F5 836 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 ANKZF1Q9H8Y5 726 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 STARD7Q9NQZ5 370 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 NOD1Q9Y239 953 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 SAR1BQ9Y6B6 198 aa16.18■□□□□ 0.18
CALD1-206ENST00000424922 PMM2O15305 246 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 STAG3L1P0CL83 205 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 THPOP40225 353 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 FAM193AP78312 1265 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
CALD1-206ENST00000424922 ENOX2Q16206 610 aaKnown RBP16.17■□□□□ 0.18
CALD1-206ENST00000424922 GPIHBP1Q8IV16 184 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 TRIM58Q8NG06 486 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
CALD1-206ENST00000424922 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
CALD1-206ENST00000424922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms