RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PCDHA12Q9UN75 941 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 CYP46A1Q9Y6A2 500 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 COL4A2P08572 1712 aa17.21■□□□□ 0.35
RPUSD3-204ENST00000424438 TRIP11Q15643 1979 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 SHISA7A6NL88 538 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 MAN2B1O00754 1011 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 ADAM12O43184 909 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 KCNA4P22459 653 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 PPP2R5DQ14738 602 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 PIK3AP1Q6ZUJ8 805 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 UROC1Q96N76 676 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 KXD1Q9BQD3 176 aa17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 RALYQ9UKM9 306 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 MRPS23Q9Y3D9 190 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-204ENST00000424438 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 RECQL4O94761 1208 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 OR1D2P34982 312 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 MLLT6P55198 1093 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 SLC8B1Q6J4K2 584 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 ZBTB8OSQ8IWT0 167 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 CELF5Q8N6W0 485 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 PDZD7Q9H5P4 517 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 ANGPTL2Q9UKU9 493 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 POLIQ9UNA4 740 aa17.19■□□□□ 0.34
RPUSD3-204ENST00000424438 SLC30A4O14863 429 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 TRAPPC3O43617 180 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 RHOP08100 348 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 ACAP1Q15027 740 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 DCAF4L1Q3SXM0 396 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 LAIR1Q6GTX8 287 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 CDR2LQ86X02 465 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 RABGGTAQ92696 567 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 TNFRSF25Q93038 417 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 SH2B1Q9NRF2 756 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 HCFC1R1Q9NWW0 138 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 CACNG4Q9UBN1 327 aa17.18■□□□□ 0.34
RPUSD3-204ENST00000424438 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 ACKR2O00590 384 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 FOXD2O60548 495 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 ABLIM3O94929 683 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 CD72P21854 359 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 MAPK6Q16659 721 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 ST13P5Q8NFI4 369 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 ZNF461Q8TAF7 563 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 OXER1Q8TDS5 423 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 HASPINQ8TF76 798 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 WASF1Q92558 559 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 PPP1R10Q96QC0 940 aaKnown RBP17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 CCDC113Q9H0I3 377 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 SNTG2Q9NY99 539 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 MAFFQ9ULX9 164 aa17.17■□□□□ 0.34
RPUSD3-204ENST00000424438 RALGAPA1Q6GYQ0 2036 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 ZNF197O14709 1029 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 PTPN2P17706 415 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 FCARP24071 287 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 CCR3P51677 355 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 MTAPQ13126 283 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 CALCRLQ16602 461 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 SLC5A9Q2M3M2 681 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 EARS2Q5JPH6 523 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 PRSS36Q5K4E3 855 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 C1orf228Q6PIY5 440 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 TCEAL8Q8IYN2 117 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 IRF7Q92985 503 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 MSANTD3Q96H12 275 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 TUFT1Q9NNX1 390 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 PARD6AQ9NPB6 346 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 HEBP1Q9NRV9 189 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 CDY1Q9Y6F8 540 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 FASNP49327 2511 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 CEP295Q9C0D2 2601 aa17.16■□□□□ 0.34
RPUSD3-204ENST00000424438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 USO1O60763 962 aaKnown RBP17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 B3GAT3O94766 335 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 PAPSS2O95340 614 aaPredicted RBP17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 RETP07949 1114 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 NAMPTP43490 491 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 SCRN1Q12765 414 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 PRPF4BQ13523 1007 aaKnown RBP17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 PPP2R5AQ15172 486 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 UPP1Q16831 310 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 TANGO2Q6ICL3 276 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 CD300LGQ6UXG3 332 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 APBB1IPQ7Z5R6 666 aaPredicted RBP17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 MAP4K3Q8IVH8 894 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 LEMD2Q8NC56 503 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 MTMR9Q96QG7 549 aa17.15■□□□□ 0.34
RPUSD3-204ENST00000424438 PLA2G2FQ9BZM2 168 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms