RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MX1P20591 662 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 MLLT6P55198 1093 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 FAM193AP78312 1265 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 PRKCEQ02156 737 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 GFPT1Q06210 699 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 NMIQ13287 307 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 CCINQ13939 588 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 HSP90AA2PQ14568 343 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 ZNF589Q86UQ0 364 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 ZNF410Q86VK4 478 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 GPIHBP1Q8IV16 184 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 SMAP1Q8IYB5 467 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 GPR65Q8IYL9 337 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 SPATA18Q8TC71 538 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 PI4K2BQ8TCG2 481 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 SPIRE2Q8WWL2 714 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 ZFYVE19Q96K21 471 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 KIF2CQ99661 725 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 TPSD1Q9BZJ3 242 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 CYP4F11Q9HBI6 524 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 AGPAT5Q9NUQ2 364 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 GTSE1Q9NYZ3 720 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 PARP2Q9UGN5 583 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 PCDHA10Q9Y5I2 948 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 MAFBQ9Y5Q3 323 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-203ENST00000424270 CDY1Q9Y6F8 540 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 SDK1Q7Z5N4 2213 aa7.07□□□□□ -1.28
SDCBP-203ENST00000424270 ATXN2Q99700 1313 aaKnown RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 HECTD1Q9ULT8 2610 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 CASTOR2A6NHX0 329 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 GOLGA8CPA6NN73 597 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 RRP8O43159 456 aaKnown RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ADAM12O43184 909 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 CHMP2AO43633 222 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SLC28A2O43868 658 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 RNF40O75150 1001 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 GJA1P17302 382 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ELAVL2Q12926 359 aaKnown RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SEMA3BQ13214 749 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 DRP2Q13474 957 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SLC35G1Q2M3R5 365 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 PMS2CLQ68D20 193 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ZNF746Q6NUN9 644 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 LPCAT2Q7L5N7 544 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 KRT25Q7Z3Z0 450 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 MRPL10Q7Z7H8 261 aaKnown RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 PIP4P1Q86T03 277 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 KSR1Q8IVT5 923 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SCUBE3Q8IX30 993 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 LSM14AQ8ND56 463 aaKnown RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 TSTD1Q8NFU3 115 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 LNX1Q8TBB1 728 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ADAMTS14Q8WXS8 1223 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 RILPL2Q969X0 211 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 EXOC4Q96A65 974 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 RNF25Q96BH1 459 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ZNF512Q96ME7 567 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ZSWIM3Q96MP5 696 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 TMEM209Q96SK2 561 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 FSCN3Q9NQT6 498 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ASAH2Q9NR71 780 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 TBC1D22BQ9NU19 505 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 ZBTB40Q9NUA8 1239 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 POLR3BQ9NW08 1133 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 KLK14Q9P0G3 267 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 CACNG4Q9UBN1 327 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 MBD1Q9UIS9 605 aaPredicted RBP7.06□□□□□ -1.28
SDCBP-203ENST00000424270 HES2Q9Y543 173 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 IPPQ9Y573 584 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 EVPLQ92817 2033 aa7.06□□□□□ -1.28
SDCBP-203ENST00000424270 SALL3Q9BXA9 1300 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 A0A087WV48 116 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 hCG_1642624A0A1W2PR95 340 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 WDR64B1ANS9 1081 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 WISP1O95388 367 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 CALM1P0DP23 149 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 CALM2P0DP24 149 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 CALM3P0DP25 149 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 AKAP5P24588 427 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 SRSF1Q07955 248 aaKnown RBP eCLIP7.05□□□□□ -1.28
SDCBP-203ENST00000424270 DSC1Q08554 894 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 SPIRE1Q08AE8 756 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 GRIK3Q13003 919 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 RAB33AQ14088 237 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 TEAD2Q15562 447 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 ITPRIPL2Q3MIP1 535 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 CCDC157Q569K6 752 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 LMBRD2Q68DH5 695 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-203ENST00000424270 ANO7Q6IWH7 933 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 RTL10Q7L3V2 364 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 PRICKLE2Q7Z3G6 844 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 RALYLQ86SE5 291 aaKnown RBP7.05□□□□□ -1.28
SDCBP-203ENST00000424270 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 LINC01465Q8N7H1 131 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 RPLP0P6Q8NHW5 317 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms