RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 AOC1P19801 751 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 FSHRP23945 695 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 GJB2P29033 226 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 CLCNKBP51801 687 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 SMTNP53814 917 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 STRN3Q13033 797 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 RAB33AQ14088 237 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 RTL10Q7L3V2 364 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 SIX5Q8N196 739 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 CEP120Q8N960 986 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 FLCNQ8NFG4 579 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 SLC7A14Q8TBB6 771 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 TCHPQ9BT92 498 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 GOLGA2P5Q9HBQ8 144 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 CNTN3Q9P232 1028 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 WNT16Q9UBV4 365 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 BACE2Q9Y5Z0 518 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 MYH11P35749 1972 aa12.66□□□□□ -0.38
SQSTM1-203ENST00000422245 VWA3AA6NCI4 1184 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 ANHXE9PGG2 379 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 H0YCG3 227 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 ABLIM1O14639 778 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 SLC16A4O15374 487 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 ADAM12O43184 909 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 TOM1L1O75674 476 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 BMP15O95972 392 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 SRFP11831 508 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 LAMP2P13473 410 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 KCNE1P15382 129 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 OR1D2P34982 312 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 OSTNP61366 133 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 HTR4Q13639 388 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 CD300LGQ6UXG3 332 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 ALKAL1Q6UXT8 129 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 SYT2Q8N9I0 419 aaPredicted RBP12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 C3orf58Q8NDZ4 430 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 TMEM161BQ8NDZ6 487 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 RSAD2Q8WXG1 361 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 AK8Q96MA6 479 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 ACAP3Q96P50 834 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 PNMA5Q96PV4 448 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 RTP3Q9BQQ7 232 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 NTPCRQ9BSD7 190 aaKnown RBP12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 SMC3Q9UQE7 1217 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 CDY1Q9Y6F8 540 aa12.65□□□□□ -0.38
SQSTM1-203ENST00000422245 H0Y858 1186 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 PODXLO00592 558 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 SYN3O14994 580 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 CD2BP2O95400 341 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 MAPTP10636 758 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 HARSP12081 509 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 NPR3P17342 541 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 SCP2P22307 547 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 RFX1P22670 979 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 TKTP29401 623 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 RPL9P32969 192 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 SLC12A3P55017 1021 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 ZPBP2Q6X784 338 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 GRASPQ7Z6J2 395 aaPredicted RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 SLC44A3Q8N4M1 653 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 KCNN1Q92952 543 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 LARSQ9P2J5 1176 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 NUMBLQ9Y6R0 609 aa12.64□□□□□ -0.39
SQSTM1-203ENST00000422245 PDCD11Q14690 1871 aaKnown RBP12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 SFI1A8K8P3 1242 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 I3L4J1 428 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 CCL16O15467 120 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 GFRA3O60609 400 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 CFHP08603 1231 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 BRCC3P46736 316 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 MCL1Q07820 350 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 MTSS1LQ765P7 747 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 CCDC105Q8IYK2 499 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 PLIN2Q99541 437 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 ARHGEF3Q9NR81 526 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 ODF2LQ9ULJ1 636 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 POLIQ9UNA4 740 aa12.63□□□□□ -0.39
SQSTM1-203ENST00000422245 NUB1Q9Y5A7 615 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms