RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
UFD1-203ENST00000421968 TRPV4Q9HBA0 871 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 GTSE1Q9NYZ3 720 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 CACNG4Q9UBN1 327 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 SAMM50Q9Y512 469 aa13.34□□□□□ -0.27
UFD1-203ENST00000421968 IPO5O00410 1097 aaKnown RBP13.33□□□□□ -0.28
UFD1-203ENST00000421968 FTH1P19P0C7X4 201 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 MX1P20591 662 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 ATXN3P54252 364 aaPredicted RBP13.33□□□□□ -0.28
UFD1-203ENST00000421968 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
UFD1-203ENST00000421968 PRKCEQ02156 737 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 CYP4F3Q08477 520 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
UFD1-203ENST00000421968 CYP4A22Q5TCH4 519 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 C11orf74Q86VG3 221 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 SUCLA2Q9P2R7 463 aaPredicted RBP13.33□□□□□ -0.28
UFD1-203ENST00000421968 MBD1Q9UIS9 605 aaPredicted RBP13.33□□□□□ -0.28
UFD1-203ENST00000421968 IPPQ9Y573 584 aa13.33□□□□□ -0.28
UFD1-203ENST00000421968 ANKRD17O75179 2603 aaKnown RBP13.32□□□□□ -0.28
UFD1-203ENST00000421968 APBB3O95704 486 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 HOXA11P31270 313 aaPredicted RBP13.32□□□□□ -0.28
UFD1-203ENST00000421968 DGKEP52429 567 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 SPIRE1Q08AE8 756 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
UFD1-203ENST00000421968 IMMTQ16891 758 aaKnown RBP13.32□□□□□ -0.28
UFD1-203ENST00000421968 RSPRY1Q96DX4 576 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 GTPBP2Q9BX10 602 aaKnown RBP13.32□□□□□ -0.28
UFD1-203ENST00000421968 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 SNTG2Q9NY99 539 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 HES2Q9Y543 173 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 PCDHB9Q9Y5E1 797 aa13.32□□□□□ -0.28
UFD1-203ENST00000421968 PTPRBP23467 1997 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
UFD1-203ENST00000421968 OPHN1O60890 802 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 GJA1P17302 382 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 ELF1P32519 619 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 FCHO2Q0JRZ9 810 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 USP39Q53GS9 565 aaKnown RBP13.31□□□□□ -0.28
UFD1-203ENST00000421968 NIPA1Q7RTP0 329 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 ZFYVE19Q96K21 471 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 PAAF1Q9BRP4 392 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 ZNF577Q9BSK1 485 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 EIF2AQ9BY44 585 aaKnown RBP13.31□□□□□ -0.28
UFD1-203ENST00000421968 PRORYQ9H606 182 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 EBF1Q9UH73 591 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 CDY1Q9Y6F8 540 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 KIF26AQ9ULI4 1882 aaPredicted RBP13.31□□□□□ -0.28
UFD1-203ENST00000421968 NOTCH2Q04721 2471 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 ADAMTS9Q9P2N4 1935 aa13.31□□□□□ -0.28
UFD1-203ENST00000421968 DOPEY2Q9Y3R5 2298 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 ERICH2A1L162 156 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 PRRG1O14668 218 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 RNF40O75150 1001 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 BCKDHBP21953 392 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 GRSF1Q12849 480 aaKnown RBP eCLIP13.3□□□□□ -0.28
UFD1-203ENST00000421968 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
UFD1-203ENST00000421968 MAPK6Q16659 721 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 HAUS6Q7Z4H7 955 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 GPIHBP1Q8IV16 184 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 CAMK1GQ96NX5 476 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 IFT122Q9HBG6 1241 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 GIT1Q9Y2X7 761 aa13.3□□□□□ -0.28
UFD1-203ENST00000421968 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 MOSPD3O75425 235 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 KIF4AO95239 1232 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 WISP1O95388 367 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 CFIP05156 583 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 FAM86B2P0C5J1 330 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 MYL4P12829 197 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 ITPKBP27987 946 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
UFD1-203ENST00000421968 GRIK3Q13003 919 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 FSTL4Q6MZW2 842 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 HS6ST3Q8IZP7 471 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 FAM181AQ8N9Y4 354 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 GSTCDQ8NEC7 633 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 CTCFLQ8NI51 663 aaPredicted RBP13.29□□□□□ -0.28
UFD1-203ENST00000421968 SH2D3AQ9BRG2 576 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 MINDY3Q9H8M7 445 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
UFD1-203ENST00000421968 APOBEC2Q9Y235 224 aaKnown RBP13.29□□□□□ -0.28
UFD1-203ENST00000421968 DOPEY1Q5JWR5 2465 aa13.29□□□□□ -0.28
UFD1-203ENST00000421968 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
UFD1-203ENST00000421968 TRABD2BA6NFA1 517 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms