RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CNNM4Q6P4Q7 775 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 PPFIBP1Q86W92 1011 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 SCAND2PQ9GZW5 306 aaPredicted RBP28.8■■■□□ 2.2
CDK9-202ENST00000421939 PLEKHA5Q9HAU0 1116 aa28.8■■■□□ 2.2
CDK9-202ENST00000421939 ANKRD63C9JTQ0 380 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 TMEM189-UBE2V1I3L0A0 370 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 MYBP10242 640 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 CLCNKBP51801 687 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 CASP5P51878 434 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 SOX4Q06945 474 aaPredicted RBP28.79■■■□□ 2.2
CDK9-202ENST00000421939 SMAD2Q15796 467 aaKnown RBP28.79■■■□□ 2.2
CDK9-202ENST00000421939 ZBTB41Q5SVQ8 909 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 L1TD1Q5T7N2 865 aaKnown RBP28.79■■■□□ 2.2
CDK9-202ENST00000421939 ADALQ6DHV7 355 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 GPR65Q8IYL9 337 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 B3GALT6Q96L58 329 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 KLHL5Q96PQ7 755 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 ACCSQ96QU6 501 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 FGFBP2Q9BYJ0 223 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 EXOC7Q9UPT5 735 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 PCDHB13Q9Y5F0 798 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 C5orf42Q9H799 3197 aa28.79■■■□□ 2.2
CDK9-202ENST00000421939 PDCD11Q14690 1871 aaKnown RBP28.78■■■□□ 2.2
CDK9-202ENST00000421939 TISP43B9A030 160 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 B3GAT3O94766 335 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 HOXB8P17481 243 aaPredicted RBP28.78■■■□□ 2.2
CDK9-202ENST00000421939 TNFSF9P41273 254 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 NUCB2P80303 420 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 ELAVL2Q12926 359 aaKnown RBP28.78■■■□□ 2.2
CDK9-202ENST00000421939 UPP1Q16831 310 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 SLFN12LQ6IEE8 588 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 SYCE2Q6PIF2 218 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 SLC22A17Q8WUG5 538 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 C7orf25Q9BPX7 421 aa28.78■■■□□ 2.2
CDK9-202ENST00000421939 TTC26A0AVF1 554 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 TNFRSF10AO00220 468 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 EPCAMP16422 314 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 CMA1P23946 247 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 KLRC2P26717 231 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 PPP2R3AQ06190 1150 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 KCNA1Q09470 495 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 ENOX2Q16206 610 aaKnown RBP28.77■■■□□ 2.2
CDK9-202ENST00000421939 DCLRE1AQ6PJP8 1040 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 CEP57L1Q8IYX8 460 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 RIN2Q8WYP3 895 aaPredicted RBP28.77■■■□□ 2.2
CDK9-202ENST00000421939 C18orf25Q96B23 403 aaPredicted RBP28.77■■■□□ 2.2
CDK9-202ENST00000421939 DDX27Q96GQ7 796 aaKnown RBP28.77■■■□□ 2.2
CDK9-202ENST00000421939 IKZF4Q9H2S9 585 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 RPF1Q9H9Y2 349 aaKnown RBP28.77■■■□□ 2.2
CDK9-202ENST00000421939 RXFP1Q9HBX9 757 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 DZANK1Q9NVP4 752 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 USP15Q9Y4E8 981 aaPredicted RBP28.77■■■□□ 2.2
CDK9-202ENST00000421939 STYXL1Q9Y6J8 313 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 TCHHQ07283 1943 aa28.77■■■□□ 2.2
CDK9-202ENST00000421939 TEX28O15482 410 aa28.76■■■□□ 2.19
CDK9-202ENST00000421939 ADH1AP07327 375 aa28.76■■■□□ 2.19
CDK9-202ENST00000421939 PFKFB1P16118 471 aa28.76■■■□□ 2.19
CDK9-202ENST00000421939 FAM171A1Q5VUB5 890 aa28.76■■■□□ 2.19
CDK9-202ENST00000421939 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.76■■■□□ 2.19
CDK9-202ENST00000421939 PRKAG3Q9UGI9 489 aa28.76■■■□□ 2.19
CDK9-202ENST00000421939 PODXLO00592 558 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 CLCN4P51793 760 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 TPRNQ4KMQ1 711 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 RTP2Q5QGT7 225 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 C3orf58Q8NDZ4 430 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 TTPALQ9BTX7 342 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 S1PR5Q9H228 398 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 TUBGCP4Q9UGJ1 667 aa28.75■■■□□ 2.19
CDK9-202ENST00000421939 CPSF3Q9UKF6 684 aaKnown RBP28.75■■■□□ 2.19
CDK9-202ENST00000421939 A0A1B0GVL5 298 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 ACTN4O43707 911 aaKnown RBP28.74■■■□□ 2.19
CDK9-202ENST00000421939 SLFN14P0C7P3 912 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 IGFBP6P24592 240 aaPredicted RBP28.74■■■□□ 2.19
CDK9-202ENST00000421939 RPL9P32969 192 aaKnown RBP28.74■■■□□ 2.19
CDK9-202ENST00000421939 CREMQ03060 361 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 ZP2Q05996 745 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 CD300LGQ6UXG3 332 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.74■■■□□ 2.19
CDK9-202ENST00000421939 STXBP4Q6ZWJ1 553 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 SYCP3Q8IZU3 236 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 POMGNT1Q8WZA1 660 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 HPS3Q969F9 1004 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 KIF12Q96FN5 646 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 APOL5Q9BWW9 433 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 SERTAD1Q9UHV2 236 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 AGO2Q9UKV8 859 aaKnown RBP28.74■■■□□ 2.19
CDK9-202ENST00000421939 HPSEQ9Y251 543 aa28.74■■■□□ 2.19
CDK9-202ENST00000421939 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.74■■■□□ 2.19
CDK9-202ENST00000421939 LACTBL1A8MY62 500 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 PRPF6O94906 941 aaKnown RBP28.73■■■□□ 2.19
CDK9-202ENST00000421939 CASP1P29466 404 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 ADSSP30520 456 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 AFMP43652 599 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 SPAG1Q07617 926 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 POSTNQ15063 836 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 PRSS55Q6UWB4 352 aaPredicted RBP28.73■■■□□ 2.19
CDK9-202ENST00000421939 UNC13DQ70J99 1090 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 CEP57Q86XR8 500 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 ADHFE1Q8IWW8 467 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 PIK3R5Q8WYR1 880 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms