RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 XKR4Q5GH76 650 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 TCP11X2Q5H9J9 407 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 TCERG1LQ5VWI1 586 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 TRIM59Q8IWR1 403 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 KIF12Q96FN5 646 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 FNBP1Q96RU3 617 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 SLC9A7Q96T83 725 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 ASB7Q9H672 318 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 MMRN2Q9H8L6 949 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 RC3H2Q9HBD1 1191 aaKnown RBP17.03■□□□□ 0.32
DDX55-203ENST00000421670 MAGEC2Q9UBF1 373 aaPredicted RBP17.03■□□□□ 0.32
DDX55-203ENST00000421670 HCSTQ9UBK5 93 aa17.03■□□□□ 0.32
DDX55-203ENST00000421670 SMIM28A0A1B0GU29 152 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 TBKBP1A7MCY6 615 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 HOXA2O43364 376 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 GJB5O95377 273 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 TNNI1P19237 187 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 MTIF2P46199 727 aaKnown RBP17.02■□□□□ 0.32
DDX55-203ENST00000421670 POU5F1Q01860 360 aaKnown RBP17.02■□□□□ 0.32
DDX55-203ENST00000421670 TMEM132DQ14C87 1099 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 C1orf220Q5T0J3 134 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 FAM109BQ6ICB4 259 aaPredicted RBP17.02■□□□□ 0.32
DDX55-203ENST00000421670 HERC6Q8IVU3 1022 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 C18orf25Q96B23 403 aaPredicted RBP17.02■□□□□ 0.32
DDX55-203ENST00000421670 PPP1R10Q96QC0 940 aaKnown RBP17.02■□□□□ 0.32
DDX55-203ENST00000421670 CGRRF1Q99675 332 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 MTMR12Q9C0I1 747 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 METTL14Q9HCE5 456 aaKnown RBP17.02■□□□□ 0.32
DDX55-203ENST00000421670 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 SCN1AP35498 2009 aa17.02■□□□□ 0.32
DDX55-203ENST00000421670 INPPL1O15357 1258 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 KCNE1P15382 129 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 EEF1GP26641 437 aaKnown RBP17.02■□□□□ 0.31
DDX55-203ENST00000421670 GUCY2FP51841 1108 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 TFAMQ00059 246 aaKnown RBP17.02■□□□□ 0.31
DDX55-203ENST00000421670 CHRDL2Q6WN34 429 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 WDR49Q8IV35 697 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 CD302Q8IX05 232 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 OR5B17Q8NGF7 314 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 URGCPQ8TCY9 931 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 TMC2Q8TDI7 906 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 SLC35C1Q96A29 364 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 YME1L1Q96TA2 773 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 ZBED2Q9BTP6 218 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 CACNG4Q9UBN1 327 aa17.02■□□□□ 0.31
DDX55-203ENST00000421670 B4GALT3O60512 393 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 THP07101 528 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
DDX55-203ENST00000421670 SOX4Q06945 474 aaPredicted RBP17.01■□□□□ 0.31
DDX55-203ENST00000421670 GRIK3Q13003 919 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 KRT31Q15323 416 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 SURF1Q15526 300 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 NAB2Q15742 525 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 ZNF516Q92618 1163 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 ZNF689Q96CS4 500 aaPredicted RBP17.01■□□□□ 0.31
DDX55-203ENST00000421670 INTS13Q9NVM9 706 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 TAB2Q9NYJ8 693 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
DDX55-203ENST00000421670 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX55-203ENST00000421670 TRANK1O15050 2925 aa17■□□□□ 0.31
DDX55-203ENST00000421670 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
DDX55-203ENST00000421670 TMEM191BP0C7N4 346 aa17■□□□□ 0.31
DDX55-203ENST00000421670 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
DDX55-203ENST00000421670 GCLMP48507 274 aa17■□□□□ 0.31
DDX55-203ENST00000421670 RABGGTBP53611 331 aa17■□□□□ 0.31
DDX55-203ENST00000421670 TPM4P67936 248 aa17■□□□□ 0.31
DDX55-203ENST00000421670 CLDN10P78369 228 aa17■□□□□ 0.31
DDX55-203ENST00000421670 RNASELQ05823 741 aaKnown RBP17■□□□□ 0.31
DDX55-203ENST00000421670 PPP3CAQ08209 521 aa17■□□□□ 0.31
DDX55-203ENST00000421670 USP37Q86T82 979 aa17■□□□□ 0.31
DDX55-203ENST00000421670 LRRC43Q8N309 656 aa17■□□□□ 0.31
DDX55-203ENST00000421670 PHOSPHO2Q8TCD6 241 aa17■□□□□ 0.31
DDX55-203ENST00000421670 TUBGCP2Q9BSJ2 902 aa17■□□□□ 0.31
DDX55-203ENST00000421670 TLL1O43897 1013 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 BMP8BP34820 402 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 HTRA4P83105 476 aaPredicted RBP16.99■□□□□ 0.31
DDX55-203ENST00000421670 ZBTB6Q15916 424 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 SCARA3Q6AZY7 606 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 ZNF280BQ86YH2 543 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 TDHQ8IZJ6 230 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 ANKRD36BP1Q96IX9 119 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 MRPL9Q9BYD2 267 aaKnown RBP16.99■□□□□ 0.31
DDX55-203ENST00000421670 DNAJB4Q9UDY4 337 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 UBQLN1Q9UMX0 589 aaKnown RBP16.99■□□□□ 0.31
DDX55-203ENST00000421670 DERAQ9Y315 318 aa16.99■□□□□ 0.31
DDX55-203ENST00000421670 LCHNA4D1U4 455 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 CASTOR2A6NHX0 329 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 DDHD2O94830 711 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 ENPEPQ07075 957 aa16.98■□□□□ 0.31
DDX55-203ENST00000421670 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms