RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 PPM1LQ5SGD2 360 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 HYIQ5T013 277 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 ALKAL1Q6UXT8 129 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 RTL10Q7L3V2 364 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 TAS1R3Q7RTX0 852 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 KCNK18Q7Z418 384 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 SIX5Q8N196 739 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 CEP120Q8N960 986 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 RTP3Q9BQQ7 232 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 NTPCRQ9BSD7 190 aaKnown RBP19.05■□□□□ 0.64
MSH6-203ENST00000420813 SLC38A7Q9NVC3 462 aa19.05■□□□□ 0.64
MSH6-203ENST00000420813 ADAM12O43184 909 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 MCF2P10911 925 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 PROZP22891 400 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 FSHRP23945 695 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 HTR4Q13639 388 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 UVSSAQ2YD98 709 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 MCTP1Q6DN14 999 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 CD300LGQ6UXG3 332 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 ANKS3Q6ZW76 656 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 DDX27Q96GQ7 796 aaKnown RBP19.04■□□□□ 0.64
MSH6-203ENST00000420813 TARS2Q9BW92 718 aaKnown RBP19.04■□□□□ 0.64
MSH6-203ENST00000420813 BACE2Q9Y5Z0 518 aa19.04■□□□□ 0.64
MSH6-203ENST00000420813 ABLIM1O14639 778 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 GFRA3O60609 400 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 XYLBO75191 536 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 CFHP08603 1231 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 OR1D2P34982 312 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 ARL6IP4Q66PJ3 421 aaKnown RBP19.03■□□□□ 0.64
MSH6-203ENST00000420813 MPZL3Q6UWV2 235 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 GRASPQ7Z6J2 395 aaPredicted RBP19.03■□□□□ 0.64
MSH6-203ENST00000420813 SPIRE2Q8WWL2 714 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 SNX27Q96L92 541 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 GOLGA2P5Q9HBQ8 144 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 KCND2Q9NZV8 630 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 FAM186AA6NE01 2351 aa19.03■□□□□ 0.64
MSH6-203ENST00000420813 RIF1Q5UIP0 2472 aaKnown RBP19.02■□□□□ 0.64
MSH6-203ENST00000420813 MIA3Q5JRA6 1907 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 KCNE1P15382 129 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 NBL1P41271 181 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 SOX4Q06945 474 aaPredicted RBP19.02■□□□□ 0.64
MSH6-203ENST00000420813 AXDND1Q5T1B0 1012 aaPredicted RBP19.02■□□□□ 0.64
MSH6-203ENST00000420813 CCDC105Q8IYK2 499 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 SYT2Q8N9I0 419 aaPredicted RBP19.02■□□□□ 0.64
MSH6-203ENST00000420813 C3orf58Q8NDZ4 430 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 SLC7A14Q8TBB6 771 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 ACAP3Q96P50 834 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 PNMA5Q96PV4 448 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 TCHPQ9BT92 498 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 SLC2A4RGQ9NR83 387 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 CNTN3Q9P232 1028 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 CDH7Q9ULB5 785 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 CDY1Q9Y6F8 540 aa19.02■□□□□ 0.64
MSH6-203ENST00000420813 PTPRZ1P23471 2315 aaPredicted RBP19.01■□□□□ 0.63
MSH6-203ENST00000420813 KRBA1A5PL33 1030 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 SLC16A4O15374 487 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 PI15O43692 258 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 PLS3P13797 630 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 IGFBP6P24592 240 aaPredicted RBP19.01■□□□□ 0.63
MSH6-203ENST00000420813 TKTP29401 623 aaKnown RBP19.01■□□□□ 0.63
MSH6-203ENST00000420813 SMTNP53814 917 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 OSTNP61366 133 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 STRN3Q13033 797 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 ZMAT2Q96NC0 199 aaKnown RBP19.01■□□□□ 0.63
MSH6-203ENST00000420813 NUMBLQ9Y6R0 609 aa19.01■□□□□ 0.63
MSH6-203ENST00000420813 H3BQV1 296 aa19■□□□□ 0.63
MSH6-203ENST00000420813 PODXLO00592 558 aa19■□□□□ 0.63
MSH6-203ENST00000420813 CCL16O15467 120 aa19■□□□□ 0.63
MSH6-203ENST00000420813 SLC26A4O43511 780 aa19■□□□□ 0.63
MSH6-203ENST00000420813 TOM1L1O75674 476 aa19■□□□□ 0.63
MSH6-203ENST00000420813 GJB2P29033 226 aa19■□□□□ 0.63
MSH6-203ENST00000420813 RPL9P32969 192 aaKnown RBP19■□□□□ 0.63
MSH6-203ENST00000420813 BRCC3P46736 316 aa19■□□□□ 0.63
MSH6-203ENST00000420813 MCM2P49736 904 aa19■□□□□ 0.63
MSH6-203ENST00000420813 ZRSR1Q15695 479 aaKnown RBP19■□□□□ 0.63
MSH6-203ENST00000420813 SLC8B1Q6J4K2 584 aa19■□□□□ 0.63
MSH6-203ENST00000420813 PHLDB3Q6NSJ2 640 aa19■□□□□ 0.63
MSH6-203ENST00000420813 RSPO2Q6UXX9 243 aaPredicted RBP19■□□□□ 0.63
MSH6-203ENST00000420813 ZPBP2Q6X784 338 aa19■□□□□ 0.63
MSH6-203ENST00000420813 MTSS1LQ765P7 747 aa19■□□□□ 0.63
MSH6-203ENST00000420813 TMEM161BQ8NDZ6 487 aa19■□□□□ 0.63
MSH6-203ENST00000420813 GPR152Q8TDT2 470 aa19■□□□□ 0.63
MSH6-203ENST00000420813 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
MSH6-203ENST00000420813 KCNH3Q9ULD8 1083 aa19■□□□□ 0.63
MSH6-203ENST00000420813 VPS13AQ96RL7 3174 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 SFI1A8K8P3 1242 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 I3L4J1 428 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 SYN3O14994 580 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 SLC12A3P55017 1021 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 NTHL1P78549 312 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 NOLC1Q14978 699 aaKnown RBP eCLIP18.99■□□□□ 0.63
MSH6-203ENST00000420813 DTWD2Q8NBA8 298 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 ZNF461Q8TAF7 563 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 FGF13Q92913 245 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 KCNN1Q92952 543 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 AK8Q96MA6 479 aa18.99■□□□□ 0.63
MSH6-203ENST00000420813 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
MSH6-203ENST00000420813 ARHGEF3Q9NR81 526 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms