RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PTGESO14684 152 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 INPPL1O15357 1258 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 TEX33O43247 280 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 STX10O60499 249 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 TPM2P07951 284 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 NFICP08651 508 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 KCNE1P15382 129 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 GTF2H1P32780 548 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 MLH1P40692 756 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 GCLMP48507 274 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 FMO5P49326 533 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.25
TMEM53-206ENST00000420706 AP3M2P53677 418 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 WDR5P61964 334 aaKnown RBP13.52□□□□□ -0.25
TMEM53-206ENST00000420706 DUOXA2Q1HG44 320 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 FILIP1LQ4L180 1135 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.25
TMEM53-206ENST00000420706 C15orf39Q6ZRI6 1047 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 TOP1MTQ969P6 601 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 FAM84AQ96KN4 292 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 ZFP42Q96MM3 310 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 TMEM117Q9H0C3 514 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 TMEM8AQ9HCN3 771 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 DERAQ9Y315 318 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 C2CD2Q9Y426 696 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 PTPRJQ12913 1337 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 RALGAPA2Q2PPJ7 1873 aa13.52□□□□□ -0.25
TMEM53-206ENST00000420706 ARL5CA6NH57 179 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 LGALS16A8MUM7 142 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 PMM2O15305 246 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 P4HA2O15460 535 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 AMHP03971 560 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 FGFR1P11362 822 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 MRE11P49959 708 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 DEFB103AP81534 67 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 TFAMQ00059 246 aaKnown RBP13.51□□□□□ -0.25
TMEM53-206ENST00000420706 TMEM132DQ14C87 1099 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 CBWD6Q4V339 395 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 CBWD3Q5JTY5 395 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 CBWD5Q5RIA9 395 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 KRT39Q6A163 491 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 SV2AQ7L0J3 742 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 HELQQ8TDG4 1101 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 CACTINQ8WUQ7 758 aaKnown RBP13.51□□□□□ -0.25
TMEM53-206ENST00000420706 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 ANKRD36BP1Q96IX9 119 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
TMEM53-206ENST00000420706 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
TMEM53-206ENST00000420706 XPO4Q9C0E2 1151 aaKnown RBP13.51□□□□□ -0.25
TMEM53-206ENST00000420706 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
TMEM53-206ENST00000420706 PES1O00541 588 aaKnown RBP13.5□□□□□ -0.25
TMEM53-206ENST00000420706 HOXA2O43364 376 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 CBFA2T2O43439 604 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 N4BP1O75113 896 aaKnown RBP13.5□□□□□ -0.25
TMEM53-206ENST00000420706 UPP2O95045 317 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 TNNC2P02585 160 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 THP07101 528 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 CYP3A5P20815 502 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 KCNJ6P48051 423 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 SCNN1GP51170 649 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 UBXN1Q04323 297 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 KCNMA1Q12791 1236 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 NAB2Q15742 525 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 ZACNQ401N2 412 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 TDRD10Q5VZ19 366 aaKnown RBP13.5□□□□□ -0.25
TMEM53-206ENST00000420706 SCARA3Q6AZY7 606 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 GLB1LQ6UWU2 654 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 TRAPPC11Q7Z392 1133 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 CASD1Q96PB1 797 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 PLAGL2Q9UPG8 496 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 COQ4Q9Y3A0 265 aa13.5□□□□□ -0.25
TMEM53-206ENST00000420706 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
TMEM53-206ENST00000420706 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 GTPBP10A4D1E9 387 aaKnown RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 ZBBXA8MT70 800 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 DGKIO75912 1065 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 VNN1O95497 513 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 POMCP01189 267 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 GATMP50440 423 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 MXI1P50539 228 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 ZNF75DP51815 510 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 GUCY2FP51841 1108 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 SOX4Q06945 474 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-206ENST00000420706 NOMO2Q5JPE7 1267 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 FKBP15Q5T1M5 1219 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 TMEM130Q8N3G9 435 aa13.49□□□□□ -0.25
TMEM53-206ENST00000420706 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms